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websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/GumbelDistribution.html
==============================================================================
---
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/GumbelDistribution.html
(added)
+++
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/GumbelDistribution.html
Sat Oct 18 20:10:38 2014
@@ -0,0 +1 @@
+<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML
1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";><html
xmlns="http://www.w3.org/1999/xhtml"; lang="en"><head><meta
http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link
rel="stylesheet" href="../.resources/report.css" type="text/css"/><link
rel="shortcut icon" href="../.resources/report.gif"
type="image/gif"/><title>GumbelDistribution</title><script
type="text/javascript" src="../.resources/sort.js"></script></head><body
onload="initialSort(['breadcrumb'])"><div class="breadcrumb"
id="breadcrumb"><span class="info"><a href="../.sessions.html"
class="el_session">Sessions</a></span><a href="../index.html"
class="el_report">Apache Commons Math</a> > <a href="index.html"
class="el_package">org.apache.commons.math3.distribution</a> > <span
class="el_class">GumbelDistribution</span></div><h1>GumbelDistribution</h1><table
class="coverage" cellspacing="0" id="coveragetable"><t
head><tr><td class="sortable" id="a"
onclick="toggleSort(this)">Element</td><td class="down sortable bar" id="b"
onclick="toggleSort(this)">Missed Instructions</td><td class="sortable ctr2"
id="c" onclick="toggleSort(this)">Cov.</td><td class="sortable bar" id="d"
onclick="toggleSort(this)">Missed Branches</td><td class="sortable ctr2" id="e"
onclick="toggleSort(this)">Cov.</td><td class="sortable ctr1" id="f"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="g"
onclick="toggleSort(this)">Cxty</td><td class="sortable ctr1" id="h"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="i"
onclick="toggleSort(this)">Lines</td><td class="sortable ctr1" id="j"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="k"
onclick="toggleSort(this)">Methods</td></tr></thead><tfoot><tr><td>Total</td><td
class="bar">27 of 137</td><td class="ctr2">80%</td><td class="bar">3 of
10</td><td class="ctr2">70%</td><td class="ctr1">5</td><td class="ctr2">19</td
><td class="ctr1">5</td><td class="ctr2">29</td><td class="ctr1">2</td><td
>class="ctr2">14</td></tr></tfoot><tbody><tr><td id="a3"><a
>href="GumbelDistribution.java.html#L126"
>class="el_method">getNumericalMean()</a></td><td class="bar" id="b0"><img
>src="../.resources/redbar.gif" width="23" height="10" title="8"
>alt="8"/></td><td class="ctr2" id="c12">0%</td><td class="bar" id="d2"/><td
>class="ctr2" id="e2">n/a</td><td class="ctr1" id="f1">1</td><td class="ctr2"
>id="g2">1</td><td class="ctr1" id="h1">1</td><td class="ctr2"
>id="i5">1</td><td class="ctr1" id="j0">1</td><td class="ctr2"
>id="k0">1</td></tr><tr><td id="a4"><a
>href="GumbelDistribution.java.html#L131"
>class="el_method">getNumericalVariance()</a></td><td class="bar" id="b1"><img
>src="../.resources/redbar.gif" width="23" height="10" title="8"
>alt="8"/></td><td class="ctr2" id="c13">0%</td><td class="bar" id="d3"/><td
>class="ctr2" id="e3">n/a</td><td class="ctr1" id="f2">1</td><td class="ctr2"
>id="g3">1</td><td class="ctr1" id
="h2">1</td><td class="ctr2" id="i6">1</td><td class="ctr1" id="j1">1</td><td
class="ctr2" id="k1">1</td></tr><tr><td id="a9"><a
href="GumbelDistribution.java.html#L71"
class="el_method">GumbelDistribution(RandomGenerator, double,
double)</a></td><td class="bar" id="b2"><img src="../.resources/redbar.gif"
width="20" height="10" title="7" alt="7"/><img src="../.resources/greenbar.gif"
width="40" height="10" title="14" alt="14"/></td><td class="ctr2"
id="c11">67%</td><td class="bar" id="d1"><img src="../.resources/redbar.gif"
width="15" height="10" title="1" alt="1"/><img src="../.resources/greenbar.gif"
width="15" height="10" title="1" alt="1"/></td><td class="ctr2"
id="e1">50%</td><td class="ctr1" id="f3">1</td><td class="ctr2"
id="g1">2</td><td class="ctr1" id="h3">1</td><td class="ctr2" id="i1">6</td><td
class="ctr1" id="j2">0</td><td class="ctr2" id="k2">1</td></tr><tr><td
id="a10"><a href="GumbelDistribution.java.html#L114"
class="el_method">inverseCumulativeProbability(double)<
/a></td><td class="bar" id="b3"><img src="../.resources/redbar.gif" width="11"
height="10" title="4" alt="4"/><img src="../.resources/greenbar.gif"
width="108" height="10" title="37" alt="37"/></td><td class="ctr2"
id="c10">90%</td><td class="bar" id="d0"><img src="../.resources/redbar.gif"
width="30" height="10" title="2" alt="2"/><img src="../.resources/greenbar.gif"
width="90" height="10" title="6" alt="6"/></td><td class="ctr2"
id="e0">75%</td><td class="ctr1" id="f0">2</td><td class="ctr2"
id="g0">5</td><td class="ctr1" id="h0">2</td><td class="ctr2" id="i0">7</td><td
class="ctr1" id="j3">0</td><td class="ctr2" id="k3">1</td></tr><tr><td
id="a1"><a href="GumbelDistribution.java.html#L101"
class="el_method">density(double)</a></td><td class="bar" id="b4"><img
src="../.resources/greenbar.gif" width="61" height="10" title="21"
alt="21"/></td><td class="ctr2" id="c0">100%</td><td class="bar" id="d4"/><td
class="ctr2" id="e4">n/a</td><td class="ctr1" id="f4">0</td><td class="ctr2" i
d="g4">1</td><td class="ctr1" id="h4">0</td><td class="ctr2" id="i2">3</td><td
class="ctr1" id="j4">0</td><td class="ctr2" id="k4">1</td></tr><tr><td
id="a0"><a href="GumbelDistribution.java.html#L108"
class="el_method">cumulativeProbability(double)</a></td><td class="bar"
id="b5"><img src="../.resources/greenbar.gif" width="40" height="10" title="14"
alt="14"/></td><td class="ctr2" id="c1">100%</td><td class="bar" id="d5"/><td
class="ctr2" id="e5">n/a</td><td class="ctr1" id="f5">0</td><td class="ctr2"
id="g5">1</td><td class="ctr1" id="h5">0</td><td class="ctr2" id="i3">2</td><td
class="ctr1" id="j5">0</td><td class="ctr2" id="k5">1</td></tr><tr><td
id="a8"><a href="GumbelDistribution.java.html#L59"
class="el_method">GumbelDistribution(double, double)</a></td><td class="bar"
id="b6"><img src="../.resources/greenbar.gif" width="23" height="10" title="8"
alt="8"/></td><td class="ctr2" id="c2">100%</td><td class="bar" id="d6"/><td
class="ctr2" id="e6">n/a</td><td class="ctr1" id="f6"
>0</td><td class="ctr2" id="g6">1</td><td class="ctr1" id="h6">0</td><td
>class="ctr2" id="i4">2</td><td class="ctr1" id="j6">0</td><td class="ctr2"
>id="k6">1</td></tr><tr><td id="a2"><a href="GumbelDistribution.java.html#L87"
>class="el_method">getLocation()</a></td><td class="bar" id="b7"><img
>src="../.resources/greenbar.gif" width="8" height="10" title="3"
>alt="3"/></td><td class="ctr2" id="c3">100%</td><td class="bar" id="d7"/><td
>class="ctr2" id="e7">n/a</td><td class="ctr1" id="f7">0</td><td class="ctr2"
>id="g7">1</td><td class="ctr1" id="h7">0</td><td class="ctr2"
>id="i7">1</td><td class="ctr1" id="j7">0</td><td class="ctr2"
>id="k7">1</td></tr><tr><td id="a5"><a href="GumbelDistribution.java.html#L96"
>class="el_method">getScale()</a></td><td class="bar" id="b8"><img
>src="../.resources/greenbar.gif" width="8" height="10" title="3"
>alt="3"/></td><td class="ctr2" id="c4">100%</td><td class="bar" id="d8"/><td
>class="ctr2" id="e8">n/a</td><td class="ctr1" id="f8">0</td><td class="ct
r2" id="g8">1</td><td class="ctr1" id="h8">0</td><td class="ctr2"
id="i8">1</td><td class="ctr1" id="j8">0</td><td class="ctr2"
id="k8">1</td></tr><tr><td id="a6"><a href="GumbelDistribution.java.html#L136"
class="el_method">getSupportLowerBound()</a></td><td class="bar" id="b9"><img
src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c5">100%</td><td class="bar" id="d9"/><td
class="ctr2" id="e9">n/a</td><td class="ctr1" id="f9">0</td><td class="ctr2"
id="g9">1</td><td class="ctr1" id="h9">0</td><td class="ctr2" id="i9">1</td><td
class="ctr1" id="j9">0</td><td class="ctr2" id="k9">1</td></tr><tr><td
id="a7"><a href="GumbelDistribution.java.html#L141"
class="el_method">getSupportUpperBound()</a></td><td class="bar" id="b10"><img
src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c6">100%</td><td class="bar" id="d10"/><td
class="ctr2" id="e10">n/a</td><td class="ctr1" id="f10">0</td><td cl
ass="ctr2" id="g10">1</td><td class="ctr1" id="h10">0</td><td class="ctr2"
id="i10">1</td><td class="ctr1" id="j10">0</td><td class="ctr2"
id="k10">1</td></tr><tr><td id="a12"><a
href="GumbelDistribution.java.html#L146"
class="el_method">isSupportLowerBoundInclusive()</a></td><td class="bar"
id="b11"><img src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c7">100%</td><td class="bar" id="d11"/><td
class="ctr2" id="e11">n/a</td><td class="ctr1" id="f11">0</td><td class="ctr2"
id="g11">1</td><td class="ctr1" id="h11">0</td><td class="ctr2"
id="i11">1</td><td class="ctr1" id="j11">0</td><td class="ctr2"
id="k11">1</td></tr><tr><td id="a13"><a
href="GumbelDistribution.java.html#L151"
class="el_method">isSupportUpperBoundInclusive()</a></td><td class="bar"
id="b12"><img src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c8">100%</td><td class="bar" id="d12"/><td
class="ctr2" id="e12">n/a</td
><td class="ctr1" id="f12">0</td><td class="ctr2" id="g12">1</td><td
>class="ctr1" id="h12">0</td><td class="ctr2" id="i12">1</td><td class="ctr1"
>id="j12">0</td><td class="ctr2" id="k12">1</td></tr><tr><td id="a11"><a
>href="GumbelDistribution.java.html#L156"
>class="el_method">isSupportConnected()</a></td><td class="bar" id="b13"><img
>src="../.resources/greenbar.gif" width="5" height="10" title="2"
>alt="2"/></td><td class="ctr2" id="c9">100%</td><td class="bar" id="d13"/><td
>class="ctr2" id="e13">n/a</td><td class="ctr1" id="f13">0</td><td
>class="ctr2" id="g13">1</td><td class="ctr1" id="h13">0</td><td class="ctr2"
>id="i13">1</td><td class="ctr1" id="j13">0</td><td class="ctr2"
>id="k13">1</td></tr></tbody></table><div class="footer"><span
>class="right">Created with <a href="http://www.eclemma.org/jacoco";>JaCoCo</a>
>0.7.0.201403182114</span></div></body></html>
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websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/GumbelDistribution.java.html
==============================================================================
---
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/GumbelDistribution.java.html
(added)
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websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/GumbelDistribution.java.html
Sat Oct 18 20:10:38 2014
@@ -0,0 +1,160 @@
+<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML
1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";><html
xmlns="http://www.w3.org/1999/xhtml"; lang="en"><head><meta
http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link
rel="stylesheet" href="../.resources/report.css" type="text/css"/><link
rel="shortcut icon" href="../.resources/report.gif"
type="image/gif"/><title>GumbelDistribution.java</title><link rel="stylesheet"
href="../.resources/prettify.css" type="text/css"/><script
type="text/javascript" src="../.resources/prettify.js"></script></head><body
onload="window['PR_TAB_WIDTH']=4;prettyPrint()"><div class="breadcrumb"
id="breadcrumb"><span class="info"><a href="../.sessions.html"
class="el_session">Sessions</a></span><a href="../index.html"
class="el_report">Apache Commons Math</a> > <a href="index.source.html"
class="el_package">org.apache.commons.math3.distribution</a> > <span
class="el_source">GumbelDistributio
n.java</span></div><h1>GumbelDistribution.java</h1><pre class="source
lang-java linenums">/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance
with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.commons.math3.distribution;
+
+import org.apache.commons.math3.exception.NotStrictlyPositiveException;
+import org.apache.commons.math3.exception.OutOfRangeException;
+import org.apache.commons.math3.exception.util.LocalizedFormats;
+import org.apache.commons.math3.random.RandomGenerator;
+import org.apache.commons.math3.random.Well19937c;
+import org.apache.commons.math3.util.FastMath;
+import org.apache.commons.math3.util.MathUtils;
+
+/**
+ * This class implements the Gumbel distribution.
+ *
+ * @see <a
href="http://en.wikipedia.org/wiki/Gumbel_distribution">Gumbel
Distribution (Wikipedia)</a>
+ * @see <a
href="http://mathworld.wolfram.com/GumbelDistribution.html">Gumbel
Distribution (Mathworld)</a>
+ *
+ * @since 3.4
+ */
+public class GumbelDistribution extends AbstractRealDistribution {
+
+ /** Serializable version identifier. */
+ private static final long serialVersionUID = 20141003;
+
+ /**
+ * Approximation of Euler's constant
+ * see
http://mathworld.wolfram.com/Euler-MascheroniConstantApproximations.html
+ */
+ private static final double EULER = FastMath.PI / (2 * FastMath.E);
+
+ /** The location parameter. */
+ private final double mu;
+ /** The scale parameter. */
+ private final double beta;
+
+ /**
+ * Build a new instance.
+ *
+ * @param mu location parameter
+ * @param beta scale parameter (must be positive)
+ * @throws NotStrictlyPositiveException if {@code beta <= 0}
+ */
+ public GumbelDistribution(double mu, double beta) {
+<span class="fc" id="L59"> this(new Well19937c(), mu, beta);</span>
+<span class="fc" id="L60"> }</span>
+
+ /**
+ * Build a new instance.
+ *
+ * @param rng Random number generator
+ * @param mu location parameter
+ * @param beta scale parameter (must be positive)
+ * @throws NotStrictlyPositiveException if {@code beta <= 0}
+ */
+ public GumbelDistribution(RandomGenerator rng, double mu, double beta) {
+<span class="fc" id="L71"> super(rng);</span>
+
+<span class="pc bpc" id="L73" title="1 of 2 branches missed."> if (beta
<= 0) {</span>
+<span class="nc" id="L74"> throw new
NotStrictlyPositiveException(LocalizedFormats.SCALE, beta);</span>
+ }
+
+<span class="fc" id="L77"> this.beta = beta;</span>
+<span class="fc" id="L78"> this.mu = mu;</span>
+<span class="fc" id="L79"> }</span>
+
+ /**
+ * Access the location parameter, {@code mu}.
+ *
+ * @return the location parameter.
+ */
+ public double getLocation() {
+<span class="fc" id="L87"> return mu;</span>
+ }
+
+ /**
+ * Access the scale parameter, {@code beta}.
+ *
+ * @return the scale parameter.
+ */
+ public double getScale() {
+<span class="fc" id="L96"> return beta;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double density(double x) {
+<span class="fc" id="L101"> final double z = (x - mu) / beta;</span>
+<span class="fc" id="L102"> final double t = FastMath.exp(-z);</span>
+<span class="fc" id="L103"> return FastMath.exp(-z - t) / beta;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double cumulativeProbability(double x) {
+<span class="fc" id="L108"> final double z = (x - mu) / beta;</span>
+<span class="fc" id="L109"> return
FastMath.exp(-FastMath.exp(-z));</span>
+ }
+
+ @Override
+ public double inverseCumulativeProbability(double p) throws
OutOfRangeException {
+<span class="fc bfc" id="L114" title="All 4 branches covered."> if (p
< 0.0 || p > 1.0) {</span>
+<span class="fc" id="L115"> throw new OutOfRangeException(p, 0.0,
1.0);</span>
+<span class="pc bpc" id="L116" title="1 of 2 branches missed."> } else
if (p == 0) {</span>
+<span class="nc" id="L117"> return Double.NEGATIVE_INFINITY;</span>
+<span class="pc bpc" id="L118" title="1 of 2 branches missed."> } else
if (p == 1) {</span>
+<span class="nc" id="L119"> return Double.POSITIVE_INFINITY;</span>
+ }
+<span class="fc" id="L121"> return mu - FastMath.log(-FastMath.log(p))
* beta;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getNumericalMean() {
+<span class="nc" id="L126"> return mu + EULER * beta;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getNumericalVariance() {
+<span class="nc" id="L131"> return (MathUtils.PI_SQUARED) / 6.0 * (beta
* beta);</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getSupportLowerBound() {
+<span class="fc" id="L136"> return Double.NEGATIVE_INFINITY;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getSupportUpperBound() {
+<span class="fc" id="L141"> return Double.POSITIVE_INFINITY;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportLowerBoundInclusive() {
+<span class="fc" id="L146"> return false;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportUpperBoundInclusive() {
+<span class="fc" id="L151"> return false;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportConnected() {
+<span class="fc" id="L156"> return true;</span>
+ }
+
+}
+</pre><div class="footer"><span class="right">Created with <a
href="http://www.eclemma.org/jacoco";>JaCoCo</a>
0.7.0.201403182114</span></div></body></html>
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==============================================================================
---
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/LaplaceDistribution.html
(added)
+++
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/LaplaceDistribution.html
Sat Oct 18 20:10:38 2014
@@ -0,0 +1 @@
+<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML
1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";><html
xmlns="http://www.w3.org/1999/xhtml"; lang="en"><head><meta
http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link
rel="stylesheet" href="../.resources/report.css" type="text/css"/><link
rel="shortcut icon" href="../.resources/report.gif"
type="image/gif"/><title>LaplaceDistribution</title><script
type="text/javascript" src="../.resources/sort.js"></script></head><body
onload="initialSort(['breadcrumb'])"><div class="breadcrumb"
id="breadcrumb"><span class="info"><a href="../.sessions.html"
class="el_session">Sessions</a></span><a href="../index.html"
class="el_report">Apache Commons Math</a> > <a href="index.html"
class="el_package">org.apache.commons.math3.distribution</a> > <span
class="el_class">LaplaceDistribution</span></div><h1>LaplaceDistribution</h1><table
class="coverage" cellspacing="0" id="coveragetable"
><thead><tr><td class="sortable" id="a"
>onclick="toggleSort(this)">Element</td><td class="down sortable bar" id="b"
>onclick="toggleSort(this)">Missed Instructions</td><td class="sortable ctr2"
>id="c" onclick="toggleSort(this)">Cov.</td><td class="sortable bar" id="d"
>onclick="toggleSort(this)">Missed Branches</td><td class="sortable ctr2"
>id="e" onclick="toggleSort(this)">Cov.</td><td class="sortable ctr1" id="f"
>onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="g"
>onclick="toggleSort(this)">Cxty</td><td class="sortable ctr1" id="h"
>onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="i"
>onclick="toggleSort(this)">Lines</td><td class="sortable ctr1" id="j"
>onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="k"
>onclick="toggleSort(this)">Methods</td></tr></thead><tfoot><tr><td>Total</td><td
> class="bar">22 of 156</td><td class="ctr2">86%</td><td class="bar">3 of
>14</td><td class="ctr2">79%</td><td class="ctr1">5</td><td class="ctr2">21<
/td><td class="ctr1">5</td><td class="ctr2">29</td><td class="ctr1">2</td><td
class="ctr2">14</td></tr></tfoot><tbody><tr><td id="a4"><a
href="LaplaceDistribution.java.html#L125"
class="el_method">getNumericalVariance()</a></td><td class="bar" id="b0"><img
src="../.resources/redbar.gif" width="17" height="10" title="8"
alt="8"/></td><td class="ctr2" id="c12">0%</td><td class="bar" id="d3"/><td
class="ctr2" id="e3">n/a</td><td class="ctr1" id="f1">1</td><td class="ctr2"
id="g3">1</td><td class="ctr1" id="h1">1</td><td class="ctr2" id="i4">1</td><td
class="ctr1" id="j0">1</td><td class="ctr2" id="k0">1</td></tr><tr><td
id="a13"><a href="LaplaceDistribution.java.html#L63"
class="el_method">LaplaceDistribution(RandomGenerator, double,
double)</a></td><td class="bar" id="b1"><img src="../.resources/redbar.gif"
width="15" height="10" title="7" alt="7"/><img src="../.resources/greenbar.gif"
width="30" height="10" title="14" alt="14"/></td><td class="ctr2"
id="c11">67%</td><td class="bar" i
d="d1"><img src="../.resources/redbar.gif" width="12" height="10" title="1"
alt="1"/><img src="../.resources/greenbar.gif" width="12" height="10" title="1"
alt="1"/></td><td class="ctr2" id="e2">50%</td><td class="ctr1"
id="f2">1</td><td class="ctr2" id="g1">2</td><td class="ctr1" id="h2">1</td><td
class="ctr2" id="i1">6</td><td class="ctr1" id="j2">0</td><td class="ctr2"
id="k1">1</td></tr><tr><td id="a8"><a href="LaplaceDistribution.java.html#L107"
class="el_method">inverseCumulativeProbability(double)</a></td><td class="bar"
id="b2"><img src="../.resources/redbar.gif" width="8" height="10" title="4"
alt="4"/><img src="../.resources/greenbar.gif" width="111" height="10"
title="51" alt="51"/></td><td class="ctr2" id="c10">93%</td><td class="bar"
id="d0"><img src="../.resources/redbar.gif" width="24" height="10" title="2"
alt="2"/><img src="../.resources/greenbar.gif" width="96" height="10" title="8"
alt="8"/></td><td class="ctr2" id="e1">80%</td><td class="ctr1"
id="f0">2</td><td c
lass="ctr2" id="g0">6</td><td class="ctr1" id="h0">2</td><td class="ctr2"
id="i0">8</td><td class="ctr1" id="j3">0</td><td class="ctr2"
id="k2">1</td></tr><tr><td id="a3"><a href="LaplaceDistribution.java.html#L120"
class="el_method">getNumericalMean()</a></td><td class="bar" id="b3"><img
src="../.resources/redbar.gif" width="6" height="10" title="3"
alt="3"/></td><td class="ctr2" id="c13">0%</td><td class="bar" id="d4"/><td
class="ctr2" id="e4">n/a</td><td class="ctr1" id="f3">1</td><td class="ctr2"
id="g4">1</td><td class="ctr1" id="h3">1</td><td class="ctr2" id="i5">1</td><td
class="ctr1" id="j1">1</td><td class="ctr2" id="k3">1</td></tr><tr><td
id="a0"><a href="LaplaceDistribution.java.html#L98"
class="el_method">cumulativeProbability(double)</a></td><td class="bar"
id="b4"><img src="../.resources/greenbar.gif" width="63" height="10" title="29"
alt="29"/></td><td class="ctr2" id="c0">100%</td><td class="bar" id="d2"><img
src="../.resources/greenbar.gif" width="24" height="10" ti
tle="2" alt="2"/></td><td class="ctr2" id="e0">100%</td><td class="ctr1"
id="f4">0</td><td class="ctr2" id="g2">2</td><td class="ctr1" id="h4">0</td><td
class="ctr2" id="i2">3</td><td class="ctr1" id="j4">0</td><td class="ctr2"
id="k4">1</td></tr><tr><td id="a1"><a href="LaplaceDistribution.java.html#L93"
class="el_method">density(double)</a></td><td class="bar" id="b5"><img
src="../.resources/greenbar.gif" width="34" height="10" title="16"
alt="16"/></td><td class="ctr2" id="c1">100%</td><td class="bar" id="d5"/><td
class="ctr2" id="e5">n/a</td><td class="ctr1" id="f5">0</td><td class="ctr2"
id="g5">1</td><td class="ctr1" id="h5">0</td><td class="ctr2" id="i6">1</td><td
class="ctr1" id="j5">0</td><td class="ctr2" id="k5">1</td></tr><tr><td
id="a12"><a href="LaplaceDistribution.java.html#L51"
class="el_method">LaplaceDistribution(double, double)</a></td><td class="bar"
id="b6"><img src="../.resources/greenbar.gif" width="17" height="10" title="8"
alt="8"/></td><td class="ctr2" id="c
2">100%</td><td class="bar" id="d6"/><td class="ctr2" id="e6">n/a</td><td
class="ctr1" id="f6">0</td><td class="ctr2" id="g6">1</td><td class="ctr1"
id="h6">0</td><td class="ctr2" id="i3">2</td><td class="ctr1" id="j6">0</td><td
class="ctr2" id="k6">1</td></tr><tr><td id="a2"><a
href="LaplaceDistribution.java.html#L79"
class="el_method">getLocation()</a></td><td class="bar" id="b7"><img
src="../.resources/greenbar.gif" width="6" height="10" title="3"
alt="3"/></td><td class="ctr2" id="c3">100%</td><td class="bar" id="d7"/><td
class="ctr2" id="e7">n/a</td><td class="ctr1" id="f7">0</td><td class="ctr2"
id="g7">1</td><td class="ctr1" id="h7">0</td><td class="ctr2" id="i7">1</td><td
class="ctr1" id="j7">0</td><td class="ctr2" id="k7">1</td></tr><tr><td
id="a5"><a href="LaplaceDistribution.java.html#L88"
class="el_method">getScale()</a></td><td class="bar" id="b8"><img
src="../.resources/greenbar.gif" width="6" height="10" title="3"
alt="3"/></td><td class="ctr2" id="c4">100%</td><td cl
ass="bar" id="d8"/><td class="ctr2" id="e8">n/a</td><td class="ctr1"
id="f8">0</td><td class="ctr2" id="g8">1</td><td class="ctr1" id="h8">0</td><td
class="ctr2" id="i8">1</td><td class="ctr1" id="j8">0</td><td class="ctr2"
id="k8">1</td></tr><tr><td id="a6"><a href="LaplaceDistribution.java.html#L130"
class="el_method">getSupportLowerBound()</a></td><td class="bar" id="b9"><img
src="../.resources/greenbar.gif" width="4" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c5">100%</td><td class="bar" id="d9"/><td
class="ctr2" id="e9">n/a</td><td class="ctr1" id="f9">0</td><td class="ctr2"
id="g9">1</td><td class="ctr1" id="h9">0</td><td class="ctr2" id="i9">1</td><td
class="ctr1" id="j9">0</td><td class="ctr2" id="k9">1</td></tr><tr><td
id="a7"><a href="LaplaceDistribution.java.html#L135"
class="el_method">getSupportUpperBound()</a></td><td class="bar" id="b10"><img
src="../.resources/greenbar.gif" width="4" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c6">100%</td>
<td class="bar" id="d10"/><td class="ctr2" id="e10">n/a</td><td class="ctr1"
id="f10">0</td><td class="ctr2" id="g10">1</td><td class="ctr1"
id="h10">0</td><td class="ctr2" id="i10">1</td><td class="ctr1"
id="j10">0</td><td class="ctr2" id="k10">1</td></tr><tr><td id="a10"><a
href="LaplaceDistribution.java.html#L140"
class="el_method">isSupportLowerBoundInclusive()</a></td><td class="bar"
id="b11"><img src="../.resources/greenbar.gif" width="4" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c7">100%</td><td class="bar" id="d11"/><td
class="ctr2" id="e11">n/a</td><td class="ctr1" id="f11">0</td><td class="ctr2"
id="g11">1</td><td class="ctr1" id="h11">0</td><td class="ctr2"
id="i11">1</td><td class="ctr1" id="j11">0</td><td class="ctr2"
id="k11">1</td></tr><tr><td id="a11"><a
href="LaplaceDistribution.java.html#L145"
class="el_method">isSupportUpperBoundInclusive()</a></td><td class="bar"
id="b12"><img src="../.resources/greenbar.gif" width="4" height="10" title="2"
alt="2"
/></td><td class="ctr2" id="c8">100%</td><td class="bar" id="d12"/><td
class="ctr2" id="e12">n/a</td><td class="ctr1" id="f12">0</td><td class="ctr2"
id="g12">1</td><td class="ctr1" id="h12">0</td><td class="ctr2"
id="i12">1</td><td class="ctr1" id="j12">0</td><td class="ctr2"
id="k12">1</td></tr><tr><td id="a9"><a
href="LaplaceDistribution.java.html#L150"
class="el_method">isSupportConnected()</a></td><td class="bar" id="b13"><img
src="../.resources/greenbar.gif" width="4" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c9">100%</td><td class="bar" id="d13"/><td
class="ctr2" id="e13">n/a</td><td class="ctr1" id="f13">0</td><td class="ctr2"
id="g13">1</td><td class="ctr1" id="h13">0</td><td class="ctr2"
id="i13">1</td><td class="ctr1" id="j13">0</td><td class="ctr2"
id="k13">1</td></tr></tbody></table><div class="footer"><span
class="right">Created with <a href="http://www.eclemma.org/jacoco";>JaCoCo</a>
0.7.0.201403182114</span></div></body></html>
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==============================================================================
---
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(added)
+++
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/LaplaceDistribution.java.html
Sat Oct 18 20:10:38 2014
@@ -0,0 +1,154 @@
+<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML
1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";><html
xmlns="http://www.w3.org/1999/xhtml"; lang="en"><head><meta
http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link
rel="stylesheet" href="../.resources/report.css" type="text/css"/><link
rel="shortcut icon" href="../.resources/report.gif"
type="image/gif"/><title>LaplaceDistribution.java</title><link rel="stylesheet"
href="../.resources/prettify.css" type="text/css"/><script
type="text/javascript" src="../.resources/prettify.js"></script></head><body
onload="window['PR_TAB_WIDTH']=4;prettyPrint()"><div class="breadcrumb"
id="breadcrumb"><span class="info"><a href="../.sessions.html"
class="el_session">Sessions</a></span><a href="../index.html"
class="el_report">Apache Commons Math</a> > <a href="index.source.html"
class="el_package">org.apache.commons.math3.distribution</a> > <span
class="el_source">LaplaceDistribut
ion.java</span></div><h1>LaplaceDistribution.java</h1><pre class="source
lang-java linenums">/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance
with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.commons.math3.distribution;
+
+import org.apache.commons.math3.exception.NotStrictlyPositiveException;
+import org.apache.commons.math3.exception.OutOfRangeException;
+import org.apache.commons.math3.exception.util.LocalizedFormats;
+import org.apache.commons.math3.random.RandomGenerator;
+import org.apache.commons.math3.random.Well19937c;
+import org.apache.commons.math3.util.FastMath;
+
+/**
+ * This class implements the Laplace distribution.
+ *
+ * @see <a
href="http://en.wikipedia.org/wiki/Laplace_distribution">Laplace
distribution (Wikipedia)</a>
+ *
+ * @since 3.4
+ */
+public class LaplaceDistribution extends AbstractRealDistribution {
+
+ /** Serializable version identifier. */
+ private static final long serialVersionUID = 20141003;
+
+ /** The location parameter. */
+ private final double mu;
+ /** The scale parameter. */
+ private final double beta;
+
+ /**
+ * Build a new instance.
+ *
+ * @param mu location parameter
+ * @param beta scale parameter (must be positive)
+ * @throws NotStrictlyPositiveException if {@code beta <= 0}
+ */
+ public LaplaceDistribution(double mu, double beta) {
+<span class="fc" id="L51"> this(new Well19937c(), mu, beta);</span>
+<span class="fc" id="L52"> }</span>
+
+ /**
+ * Build a new instance.
+ *
+ * @param rng Random number generator
+ * @param mu location parameter
+ * @param beta scale parameter (must be positive)
+ * @throws NotStrictlyPositiveException if {@code beta <= 0}
+ */
+ public LaplaceDistribution(RandomGenerator rng, double mu, double beta) {
+<span class="fc" id="L63"> super(rng);</span>
+
+<span class="pc bpc" id="L65" title="1 of 2 branches missed."> if (beta
<= 0.0) {</span>
+<span class="nc" id="L66"> throw new
NotStrictlyPositiveException(LocalizedFormats.NOT_POSITIVE_SCALE, beta);</span>
+ }
+
+<span class="fc" id="L69"> this.mu = mu;</span>
+<span class="fc" id="L70"> this.beta = beta;</span>
+<span class="fc" id="L71"> }</span>
+
+ /**
+ * Access the location parameter, {@code mu}.
+ *
+ * @return the location parameter.
+ */
+ public double getLocation() {
+<span class="fc" id="L79"> return mu;</span>
+ }
+
+ /**
+ * Access the scale parameter, {@code beta}.
+ *
+ * @return the scale parameter.
+ */
+ public double getScale() {
+<span class="fc" id="L88"> return beta;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double density(double x) {
+<span class="fc" id="L93"> return FastMath.exp(-FastMath.abs(x - mu) /
beta) / (2.0 * beta);</span>
+ }
+
+ /** {@inheritDoc} */
+ public double cumulativeProbability(double x) {
+<span class="fc bfc" id="L98" title="All 2 branches covered."> if (x
<= mu) {</span>
+<span class="fc" id="L99"> return FastMath.exp((x - mu) / beta) /
2.0;</span>
+ } else {
+<span class="fc" id="L101"> return 1.0 - FastMath.exp((mu - x) /
beta) / 2.0;</span>
+ }
+ }
+
+ @Override
+ public double inverseCumulativeProbability(double p) throws
OutOfRangeException {
+<span class="fc bfc" id="L107" title="All 4 branches covered."> if (p
< 0.0 || p > 1.0) {</span>
+<span class="fc" id="L108"> throw new OutOfRangeException(p, 0.0,
1.0);</span>
+<span class="pc bpc" id="L109" title="1 of 2 branches missed."> } else
if (p == 0) {</span>
+<span class="nc" id="L110"> return 0.0;</span>
+<span class="pc bpc" id="L111" title="1 of 2 branches missed."> } else
if (p == 1) {</span>
+<span class="nc" id="L112"> return Double.POSITIVE_INFINITY;</span>
+ }
+<span class="fc bfc" id="L114" title="All 2 branches covered."> double
x = (p > 0.5) ? -Math.log(2.0 - 2.0 * p) : Math.log(2.0 * p);</span>
+<span class="fc" id="L115"> return mu + beta * x;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getNumericalMean() {
+<span class="nc" id="L120"> return mu;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getNumericalVariance() {
+<span class="nc" id="L125"> return 2.0 * beta * beta;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getSupportLowerBound() {
+<span class="fc" id="L130"> return Double.NEGATIVE_INFINITY;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getSupportUpperBound() {
+<span class="fc" id="L135"> return Double.POSITIVE_INFINITY;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportLowerBoundInclusive() {
+<span class="fc" id="L140"> return false;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportUpperBoundInclusive() {
+<span class="fc" id="L145"> return false;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportConnected() {
+<span class="fc" id="L150"> return true;</span>
+ }
+
+}
+</pre><div class="footer"><span class="right">Created with <a
href="http://www.eclemma.org/jacoco";>JaCoCo</a>
0.7.0.201403182114</span></div></body></html>
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==============================================================================
---
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/LogisticDistribution.html
(added)
+++
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/LogisticDistribution.html
Sat Oct 18 20:10:38 2014
@@ -0,0 +1 @@
+<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML
1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";><html
xmlns="http://www.w3.org/1999/xhtml"; lang="en"><head><meta
http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link
rel="stylesheet" href="../.resources/report.css" type="text/css"/><link
rel="shortcut icon" href="../.resources/report.gif"
type="image/gif"/><title>LogisticDistribution</title><script
type="text/javascript" src="../.resources/sort.js"></script></head><body
onload="initialSort(['breadcrumb'])"><div class="breadcrumb"
id="breadcrumb"><span class="info"><a href="../.sessions.html"
class="el_session">Sessions</a></span><a href="../index.html"
class="el_report">Apache Commons Math</a> > <a href="index.html"
class="el_package">org.apache.commons.math3.distribution</a> > <span
class="el_class">LogisticDistribution</span></div><h1>LogisticDistribution</h1><table
class="coverage" cellspacing="0" id="coveragetab
le"><thead><tr><td class="sortable" id="a"
onclick="toggleSort(this)">Element</td><td class="down sortable bar" id="b"
onclick="toggleSort(this)">Missed Instructions</td><td class="sortable ctr2"
id="c" onclick="toggleSort(this)">Cov.</td><td class="sortable bar" id="d"
onclick="toggleSort(this)">Missed Branches</td><td class="sortable ctr2" id="e"
onclick="toggleSort(this)">Cov.</td><td class="sortable ctr1" id="f"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="g"
onclick="toggleSort(this)">Cxty</td><td class="sortable ctr1" id="h"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="i"
onclick="toggleSort(this)">Lines</td><td class="sortable ctr1" id="j"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="k"
onclick="toggleSort(this)">Methods</td></tr></thead><tfoot><tr><td>Total</td><td
class="bar">24 of 146</td><td class="ctr2">84%</td><td class="bar">3 of
10</td><td class="ctr2">70%</td><td class="ctr1">5</td><td class="ctr2">
19</td><td class="ctr1">5</td><td class="ctr2">29</td><td
class="ctr1">2</td><td class="ctr2">14</td></tr></tfoot><tbody><tr><td
id="a4"><a href="LogisticDistribution.java.html#L125"
class="el_method">getNumericalVariance()</a></td><td class="bar" id="b0"><img
src="../.resources/redbar.gif" width="27" height="10" title="10"
alt="10"/></td><td class="ctr2" id="c12">0%</td><td class="bar" id="d2"/><td
class="ctr2" id="e2">n/a</td><td class="ctr1" id="f1">1</td><td class="ctr2"
id="g2">1</td><td class="ctr1" id="h1">1</td><td class="ctr2" id="i5">1</td><td
class="ctr1" id="j0">1</td><td class="ctr2" id="k0">1</td></tr><tr><td
id="a13"><a href="LogisticDistribution.java.html#L65"
class="el_method">LogisticDistribution(RandomGenerator, double,
double)</a></td><td class="bar" id="b1"><img src="../.resources/redbar.gif"
width="19" height="10" title="7" alt="7"/><img src="../.resources/greenbar.gif"
width="39" height="10" title="14" alt="14"/></td><td class="ctr2"
id="c11">67%</td><td class
="bar" id="d1"><img src="../.resources/redbar.gif" width="15" height="10"
title="1" alt="1"/><img src="../.resources/greenbar.gif" width="15" height="10"
title="1" alt="1"/></td><td class="ctr2" id="e1">50%</td><td class="ctr1"
id="f2">1</td><td class="ctr2" id="g1">2</td><td class="ctr1" id="h2">1</td><td
class="ctr2" id="i1">6</td><td class="ctr1" id="j2">0</td><td class="ctr2"
id="k1">1</td></tr><tr><td id="a8"><a
href="LogisticDistribution.java.html#L108"
class="el_method">inverseCumulativeProbability(double)</a></td><td class="bar"
id="b2"><img src="../.resources/redbar.gif" width="11" height="10" title="4"
alt="4"/><img src="../.resources/greenbar.gif" width="108" height="10"
title="39" alt="39"/></td><td class="ctr2" id="c10">91%</td><td class="bar"
id="d0"><img src="../.resources/redbar.gif" width="30" height="10" title="2"
alt="2"/><img src="../.resources/greenbar.gif" width="90" height="10" title="6"
alt="6"/></td><td class="ctr2" id="e0">75%</td><td class="ctr1" id="f0">2
</td><td class="ctr2" id="g0">5</td><td class="ctr1" id="h0">2</td><td
class="ctr2" id="i0">7</td><td class="ctr1" id="j3">0</td><td class="ctr2"
id="k2">1</td></tr><tr><td id="a3"><a
href="LogisticDistribution.java.html#L120"
class="el_method">getNumericalMean()</a></td><td class="bar" id="b3"><img
src="../.resources/redbar.gif" width="8" height="10" title="3"
alt="3"/></td><td class="ctr2" id="c13">0%</td><td class="bar" id="d3"/><td
class="ctr2" id="e3">n/a</td><td class="ctr1" id="f3">1</td><td class="ctr2"
id="g3">1</td><td class="ctr1" id="h3">1</td><td class="ctr2" id="i6">1</td><td
class="ctr1" id="j1">1</td><td class="ctr2" id="k3">1</td></tr><tr><td
id="a1"><a href="LogisticDistribution.java.html#L95"
class="el_method">density(double)</a></td><td class="bar" id="b4"><img
src="../.resources/greenbar.gif" width="75" height="10" title="27"
alt="27"/></td><td class="ctr2" id="c0">100%</td><td class="bar" id="d4"/><td
class="ctr2" id="e4">n/a</td><td class="ctr1" id="f4">0</td>
<td class="ctr2" id="g4">1</td><td class="ctr1" id="h4">0</td><td class="ctr2"
id="i2">3</td><td class="ctr1" id="j4">0</td><td class="ctr2"
id="k4">1</td></tr><tr><td id="a0"><a
href="LogisticDistribution.java.html#L102"
class="el_method">cumulativeProbability(double)</a></td><td class="bar"
id="b5"><img src="../.resources/greenbar.gif" width="50" height="10" title="18"
alt="18"/></td><td class="ctr2" id="c1">100%</td><td class="bar" id="d5"/><td
class="ctr2" id="e5">n/a</td><td class="ctr1" id="f5">0</td><td class="ctr2"
id="g5">1</td><td class="ctr1" id="h5">0</td><td class="ctr2" id="i3">2</td><td
class="ctr1" id="j5">0</td><td class="ctr2" id="k5">1</td></tr><tr><td
id="a12"><a href="LogisticDistribution.java.html#L53"
class="el_method">LogisticDistribution(double, double)</a></td><td class="bar"
id="b6"><img src="../.resources/greenbar.gif" width="22" height="10" title="8"
alt="8"/></td><td class="ctr2" id="c2">100%</td><td class="bar" id="d6"/><td
class="ctr2" id="e6">n/a</td
><td class="ctr1" id="f6">0</td><td class="ctr2" id="g6">1</td><td
>class="ctr1" id="h6">0</td><td class="ctr2" id="i4">2</td><td class="ctr1"
>id="j6">0</td><td class="ctr2" id="k6">1</td></tr><tr><td id="a2"><a
>href="LogisticDistribution.java.html#L81"
>class="el_method">getLocation()</a></td><td class="bar" id="b7"><img
>src="../.resources/greenbar.gif" width="8" height="10" title="3"
>alt="3"/></td><td class="ctr2" id="c3">100%</td><td class="bar" id="d7"/><td
>class="ctr2" id="e7">n/a</td><td class="ctr1" id="f7">0</td><td class="ctr2"
>id="g7">1</td><td class="ctr1" id="h7">0</td><td class="ctr2"
>id="i7">1</td><td class="ctr1" id="j7">0</td><td class="ctr2"
>id="k7">1</td></tr><tr><td id="a5"><a
>href="LogisticDistribution.java.html#L90"
>class="el_method">getScale()</a></td><td class="bar" id="b8"><img
>src="../.resources/greenbar.gif" width="8" height="10" title="3"
>alt="3"/></td><td class="ctr2" id="c4">100%</td><td class="bar" id="d8"/><td
>class="ctr2" id="e8">n/a</td><td class="ctr1
" id="f8">0</td><td class="ctr2" id="g8">1</td><td class="ctr1"
id="h8">0</td><td class="ctr2" id="i8">1</td><td class="ctr1" id="j8">0</td><td
class="ctr2" id="k8">1</td></tr><tr><td id="a6"><a
href="LogisticDistribution.java.html#L130"
class="el_method">getSupportLowerBound()</a></td><td class="bar" id="b9"><img
src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c5">100%</td><td class="bar" id="d9"/><td
class="ctr2" id="e9">n/a</td><td class="ctr1" id="f9">0</td><td class="ctr2"
id="g9">1</td><td class="ctr1" id="h9">0</td><td class="ctr2" id="i9">1</td><td
class="ctr1" id="j9">0</td><td class="ctr2" id="k9">1</td></tr><tr><td
id="a7"><a href="LogisticDistribution.java.html#L135"
class="el_method">getSupportUpperBound()</a></td><td class="bar" id="b10"><img
src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c6">100%</td><td class="bar" id="d10"/><td
class="ctr2" id="e10">n/a</td><td c
lass="ctr1" id="f10">0</td><td class="ctr2" id="g10">1</td><td class="ctr1"
id="h10">0</td><td class="ctr2" id="i10">1</td><td class="ctr1"
id="j10">0</td><td class="ctr2" id="k10">1</td></tr><tr><td id="a10"><a
href="LogisticDistribution.java.html#L140"
class="el_method">isSupportLowerBoundInclusive()</a></td><td class="bar"
id="b11"><img src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c7">100%</td><td class="bar" id="d11"/><td
class="ctr2" id="e11">n/a</td><td class="ctr1" id="f11">0</td><td class="ctr2"
id="g11">1</td><td class="ctr1" id="h11">0</td><td class="ctr2"
id="i11">1</td><td class="ctr1" id="j11">0</td><td class="ctr2"
id="k11">1</td></tr><tr><td id="a11"><a
href="LogisticDistribution.java.html#L145"
class="el_method">isSupportUpperBoundInclusive()</a></td><td class="bar"
id="b12"><img src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c8">100%</td><td class="bar" id="d1
2"/><td class="ctr2" id="e12">n/a</td><td class="ctr1" id="f12">0</td><td
class="ctr2" id="g12">1</td><td class="ctr1" id="h12">0</td><td class="ctr2"
id="i12">1</td><td class="ctr1" id="j12">0</td><td class="ctr2"
id="k12">1</td></tr><tr><td id="a9"><a
href="LogisticDistribution.java.html#L150"
class="el_method">isSupportConnected()</a></td><td class="bar" id="b13"><img
src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c9">100%</td><td class="bar" id="d13"/><td
class="ctr2" id="e13">n/a</td><td class="ctr1" id="f13">0</td><td class="ctr2"
id="g13">1</td><td class="ctr1" id="h13">0</td><td class="ctr2"
id="i13">1</td><td class="ctr1" id="j13">0</td><td class="ctr2"
id="k13">1</td></tr></tbody></table><div class="footer"><span
class="right">Created with <a href="http://www.eclemma.org/jacoco";>JaCoCo</a>
0.7.0.201403182114</span></div></body></html>
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+++
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@@ -0,0 +1,154 @@
+<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML
1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";><html
xmlns="http://www.w3.org/1999/xhtml"; lang="en"><head><meta
http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link
rel="stylesheet" href="../.resources/report.css" type="text/css"/><link
rel="shortcut icon" href="../.resources/report.gif"
type="image/gif"/><title>LogisticDistribution.java</title><link
rel="stylesheet" href="../.resources/prettify.css" type="text/css"/><script
type="text/javascript" src="../.resources/prettify.js"></script></head><body
onload="window['PR_TAB_WIDTH']=4;prettyPrint()"><div class="breadcrumb"
id="breadcrumb"><span class="info"><a href="../.sessions.html"
class="el_session">Sessions</a></span><a href="../index.html"
class="el_report">Apache Commons Math</a> > <a href="index.source.html"
class="el_package">org.apache.commons.math3.distribution</a> > <span
class="el_source">LogisticDistrib
ution.java</span></div><h1>LogisticDistribution.java</h1><pre class="source
lang-java linenums">/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance
with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.commons.math3.distribution;
+
+import org.apache.commons.math3.exception.NotStrictlyPositiveException;
+import org.apache.commons.math3.exception.OutOfRangeException;
+import org.apache.commons.math3.exception.util.LocalizedFormats;
+import org.apache.commons.math3.random.RandomGenerator;
+import org.apache.commons.math3.random.Well19937c;
+import org.apache.commons.math3.util.FastMath;
+import org.apache.commons.math3.util.MathUtils;
+
+/**
+ * This class implements the Logistic distribution.
+ *
+ * @see <a
href="http://en.wikipedia.org/wiki/Logistic_distribution">Logistic
Distribution (Wikipedia)</a>
+ * @see <a
href="http://mathworld.wolfram.com/LogisticDistribution.html">Logistic
Distribution (Mathworld)</a>
+ *
+ * @since 3.4
+ */
+public class LogisticDistribution extends AbstractRealDistribution {
+
+ /** Serializable version identifier. */
+ private static final long serialVersionUID = 20141003;
+
+ /** The location parameter. */
+ private final double mu;
+ /** The scale parameter. */
+ private final double s;
+
+ /**
+ * Build a new instance.
+ *
+ * @param mu location parameter
+ * @param s scale parameter (must be positive)
+ * @throws NotStrictlyPositiveException if {@code beta <= 0}
+ */
+ public LogisticDistribution(double mu, double s) {
+<span class="fc" id="L53"> this(new Well19937c(), mu, s);</span>
+<span class="fc" id="L54"> }</span>
+
+ /**
+ * Build a new instance.
+ *
+ * @param rng Random number generator
+ * @param mu location parameter
+ * @param s scale parameter (must be positive)
+ * @throws NotStrictlyPositiveException if {@code beta <= 0}
+ */
+ public LogisticDistribution(RandomGenerator rng, double mu, double s) {
+<span class="fc" id="L65"> super(rng);</span>
+
+<span class="pc bpc" id="L67" title="1 of 2 branches missed."> if (s
<= 0.0) {</span>
+<span class="nc" id="L68"> throw new
NotStrictlyPositiveException(LocalizedFormats.NOT_POSITIVE_SCALE, s);</span>
+ }
+
+<span class="fc" id="L71"> this.mu = mu;</span>
+<span class="fc" id="L72"> this.s = s;</span>
+<span class="fc" id="L73"> }</span>
+
+ /**
+ * Access the location parameter, {@code mu}.
+ *
+ * @return the location parameter.
+ */
+ public double getLocation() {
+<span class="fc" id="L81"> return mu;</span>
+ }
+
+ /**
+ * Access the scale parameter, {@code s}.
+ *
+ * @return the scale parameter.
+ */
+ public double getScale() {
+<span class="fc" id="L90"> return s;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double density(double x) {
+<span class="fc" id="L95"> double z = (x - mu) / s;</span>
+<span class="fc" id="L96"> double v = FastMath.exp(-z);</span>
+<span class="fc" id="L97"> return 1 / s * v / ((1.0 + v) * (1.0 +
v));</span>
+ }
+
+ /** {@inheritDoc} */
+ public double cumulativeProbability(double x) {
+<span class="fc" id="L102"> double z = 1 / s * (x - mu);</span>
+<span class="fc" id="L103"> return 1.0 / (1.0 +
FastMath.exp(-z));</span>
+ }
+
+ @Override
+ public double inverseCumulativeProbability(double p) throws
OutOfRangeException {
+<span class="fc bfc" id="L108" title="All 4 branches covered."> if (p
< 0.0 || p > 1.0) {</span>
+<span class="fc" id="L109"> throw new OutOfRangeException(p, 0.0,
1.0);</span>
+<span class="pc bpc" id="L110" title="1 of 2 branches missed."> } else
if (p == 0) {</span>
+<span class="nc" id="L111"> return 0.0;</span>
+<span class="pc bpc" id="L112" title="1 of 2 branches missed."> } else
if (p == 1) {</span>
+<span class="nc" id="L113"> return Double.POSITIVE_INFINITY;</span>
+ }
+<span class="fc" id="L115"> return s * Math.log(p / (1.0 - p)) +
mu;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getNumericalMean() {
+<span class="nc" id="L120"> return mu;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getNumericalVariance() {
+<span class="nc" id="L125"> return (MathUtils.PI_SQUARED / 3.0) * (1.0
/ (s * s));</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getSupportLowerBound() {
+<span class="fc" id="L130"> return Double.NEGATIVE_INFINITY;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getSupportUpperBound() {
+<span class="fc" id="L135"> return Double.POSITIVE_INFINITY;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportLowerBoundInclusive() {
+<span class="fc" id="L140"> return false;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportUpperBoundInclusive() {
+<span class="fc" id="L145"> return false;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportConnected() {
+<span class="fc" id="L150"> return true;</span>
+ }
+
+}
+</pre><div class="footer"><span class="right">Created with <a
href="http://www.eclemma.org/jacoco";>JaCoCo</a>
0.7.0.201403182114</span></div></body></html>
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websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/NakagamiDistribution.html
==============================================================================
---
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/NakagamiDistribution.html
(added)
+++
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/NakagamiDistribution.html
Sat Oct 18 20:10:38 2014
@@ -0,0 +1 @@
+<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML
1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";><html
xmlns="http://www.w3.org/1999/xhtml"; lang="en"><head><meta
http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link
rel="stylesheet" href="../.resources/report.css" type="text/css"/><link
rel="shortcut icon" href="../.resources/report.gif"
type="image/gif"/><title>NakagamiDistribution</title><script
type="text/javascript" src="../.resources/sort.js"></script></head><body
onload="initialSort(['breadcrumb'])"><div class="breadcrumb"
id="breadcrumb"><span class="info"><a href="../.sessions.html"
class="el_session">Sessions</a></span><a href="../index.html"
class="el_report">Apache Commons Math</a> > <a href="index.html"
class="el_package">org.apache.commons.math3.distribution</a> > <span
class="el_class">NakagamiDistribution</span></div><h1>NakagamiDistribution</h1><table
class="coverage" cellspacing="0" id="coveragetab
le"><thead><tr><td class="sortable" id="a"
onclick="toggleSort(this)">Element</td><td class="down sortable bar" id="b"
onclick="toggleSort(this)">Missed Instructions</td><td class="sortable ctr2"
id="c" onclick="toggleSort(this)">Cov.</td><td class="sortable bar" id="d"
onclick="toggleSort(this)">Missed Branches</td><td class="sortable ctr2" id="e"
onclick="toggleSort(this)">Cov.</td><td class="sortable ctr1" id="f"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="g"
onclick="toggleSort(this)">Cxty</td><td class="sortable ctr1" id="h"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="i"
onclick="toggleSort(this)">Lines</td><td class="sortable ctr1" id="j"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="k"
onclick="toggleSort(this)">Methods</td></tr></thead><tfoot><tr><td>Total</td><td
class="bar">16 of 170</td><td class="ctr2">91%</td><td class="bar">2 of
6</td><td class="ctr2">67%</td><td class="ctr1">2</td><td class="ctr2">1
8</td><td class="ctr1">2</td><td class="ctr2">28</td><td
class="ctr1">0</td><td class="ctr2">15</td></tr></tfoot><tbody><tr><td
id="a14"><a href="NakagamiDistribution.java.html#L87"
class="el_method">NakagamiDistribution(RandomGenerator, double, double,
double)</a></td><td class="bar" id="b0"><img src="../.resources/redbar.gif"
width="42" height="10" title="16" alt="16"/><img
src="../.resources/greenbar.gif" width="56" height="10" title="21"
alt="21"/></td><td class="ctr2" id="c14">57%</td><td class="bar" id="d0"><img
src="../.resources/redbar.gif" width="60" height="10" title="2" alt="2"/><img
src="../.resources/greenbar.gif" width="60" height="10" title="2"
alt="2"/></td><td class="ctr2" id="e1">50%</td><td class="ctr1"
id="f0">2</td><td class="ctr2" id="g0">3</td><td class="ctr1" id="h0">2</td><td
class="ctr2" id="i0">9</td><td class="ctr1" id="j0">0</td><td class="ctr2"
id="k0">1</td></tr><tr><td id="a1"><a
href="NakagamiDistribution.java.html#L126" class="el_method">density(dou
ble)</a></td><td class="bar" id="b1"><img src="../.resources/greenbar.gif"
width="120" height="10" title="45" alt="45"/></td><td class="ctr2"
id="c0">100%</td><td class="bar" id="d1"><img src="../.resources/greenbar.gif"
width="60" height="10" title="2" alt="2"/></td><td class="ctr2"
id="e0">100%</td><td class="ctr1" id="f1">0</td><td class="ctr2"
id="g1">2</td><td class="ctr1" id="h1">0</td><td class="ctr2" id="i1">3</td><td
class="ctr1" id="j1">0</td><td class="ctr2" id="k1">1</td></tr><tr><td
id="a3"><a href="NakagamiDistribution.java.html#L145"
class="el_method">getNumericalVariance()</a></td><td class="bar" id="b2"><img
src="../.resources/greenbar.gif" width="64" height="10" title="24"
alt="24"/></td><td class="ctr2" id="c1">100%</td><td class="bar" id="d2"/><td
class="ctr2" id="e2">n/a</td><td class="ctr1" id="f2">0</td><td class="ctr2"
id="g2">1</td><td class="ctr1" id="h2">0</td><td class="ctr2" id="i2">2</td><td
class="ctr1" id="j2">0</td><td class="ctr2" id="k2">1</td></tr
><tr><td id="a2"><a href="NakagamiDistribution.java.html#L140"
>class="el_method">getNumericalMean()</a></td><td class="bar" id="b3"><img
>src="../.resources/greenbar.gif" width="45" height="10" title="17"
>alt="17"/></td><td class="ctr2" id="c2">100%</td><td class="bar" id="d3"/><td
>class="ctr2" id="e3">n/a</td><td class="ctr1" id="f3">0</td><td class="ctr2"
>id="g3">1</td><td class="ctr1" id="h3">0</td><td class="ctr2"
>id="i5">1</td><td class="ctr1" id="j3">0</td><td class="ctr2"
>id="k3">1</td></tr><tr><td id="a0"><a
>href="NakagamiDistribution.java.html#L135"
>class="el_method">cumulativeProbability(double)</a></td><td class="bar"
>id="b4"><img src="../.resources/greenbar.gif" width="34" height="10"
>title="13" alt="13"/></td><td class="ctr2" id="c3">100%</td><td class="bar"
>id="d4"/><td class="ctr2" id="e4">n/a</td><td class="ctr1" id="f4">0</td><td
>class="ctr2" id="g4">1</td><td class="ctr1" id="h4">0</td><td class="ctr2"
>id="i6">1</td><td class="ctr1" id="j4">0</td><td class="ctr2" id
="k4">1</td></tr><tr><td id="a13"><a href="NakagamiDistribution.java.html#L72"
class="el_method">NakagamiDistribution(double, double, double)</a></td><td
class="bar" id="b5"><img src="../.resources/greenbar.gif" width="24"
height="10" title="9" alt="9"/></td><td class="ctr2" id="c4">100%</td><td
class="bar" id="d5"/><td class="ctr2" id="e5">n/a</td><td class="ctr1"
id="f5">0</td><td class="ctr2" id="g5">1</td><td class="ctr1" id="h5">0</td><td
class="ctr2" id="i3">2</td><td class="ctr1" id="j5">0</td><td class="ctr2"
id="k5">1</td></tr><tr><td id="a12"><a
href="NakagamiDistribution.java.html#L58"
class="el_method">NakagamiDistribution(double, double)</a></td><td class="bar"
id="b6"><img src="../.resources/greenbar.gif" width="16" height="10" title="6"
alt="6"/></td><td class="ctr2" id="c5">100%</td><td class="bar" id="d6"/><td
class="ctr2" id="e6">n/a</td><td class="ctr1" id="f6">0</td><td class="ctr2"
id="g6">1</td><td class="ctr1" id="h6">0</td><td class="ctr2" id="i4">2</td><td
c
lass="ctr1" id="j6">0</td><td class="ctr2" id="k6">1</td></tr><tr><td
id="a5"><a href="NakagamiDistribution.java.html#L107"
class="el_method">getShape()</a></td><td class="bar" id="b7"><img
src="../.resources/greenbar.gif" width="8" height="10" title="3"
alt="3"/></td><td class="ctr2" id="c6">100%</td><td class="bar" id="d7"/><td
class="ctr2" id="e7">n/a</td><td class="ctr1" id="f7">0</td><td class="ctr2"
id="g7">1</td><td class="ctr1" id="h7">0</td><td class="ctr2" id="i7">1</td><td
class="ctr1" id="j7">0</td><td class="ctr2" id="k7">1</td></tr><tr><td
id="a4"><a href="NakagamiDistribution.java.html#L116"
class="el_method">getScale()</a></td><td class="bar" id="b8"><img
src="../.resources/greenbar.gif" width="8" height="10" title="3"
alt="3"/></td><td class="ctr2" id="c7">100%</td><td class="bar" id="d8"/><td
class="ctr2" id="e8">n/a</td><td class="ctr1" id="f8">0</td><td class="ctr2"
id="g8">1</td><td class="ctr1" id="h8">0</td><td class="ctr2" id="i8">1</td><td
class="ctr1" id="j
8">0</td><td class="ctr2" id="k8">1</td></tr><tr><td id="a6"><a
href="NakagamiDistribution.java.html#L121"
class="el_method">getSolverAbsoluteAccuracy()</a></td><td class="bar"
id="b9"><img src="../.resources/greenbar.gif" width="8" height="10" title="3"
alt="3"/></td><td class="ctr2" id="c8">100%</td><td class="bar" id="d9"/><td
class="ctr2" id="e9">n/a</td><td class="ctr1" id="f9">0</td><td class="ctr2"
id="g9">1</td><td class="ctr1" id="h9">0</td><td class="ctr2" id="i9">1</td><td
class="ctr1" id="j9">0</td><td class="ctr2" id="k9">1</td></tr><tr><td
id="a7"><a href="NakagamiDistribution.java.html#L151"
class="el_method">getSupportLowerBound()</a></td><td class="bar" id="b10"><img
src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c9">100%</td><td class="bar" id="d10"/><td
class="ctr2" id="e10">n/a</td><td class="ctr1" id="f10">0</td><td class="ctr2"
id="g10">1</td><td class="ctr1" id="h10">0</td><td class="ctr2"
id="i10">1</td><td
class="ctr1" id="j10">0</td><td class="ctr2" id="k10">1</td></tr><tr><td
id="a8"><a href="NakagamiDistribution.java.html#L156"
class="el_method">getSupportUpperBound()</a></td><td class="bar" id="b11"><img
src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c10">100%</td><td class="bar" id="d11"/><td
class="ctr2" id="e11">n/a</td><td class="ctr1" id="f11">0</td><td class="ctr2"
id="g11">1</td><td class="ctr1" id="h11">0</td><td class="ctr2"
id="i11">1</td><td class="ctr1" id="j11">0</td><td class="ctr2"
id="k11">1</td></tr><tr><td id="a10"><a
href="NakagamiDistribution.java.html#L161"
class="el_method">isSupportLowerBoundInclusive()</a></td><td class="bar"
id="b12"><img src="../.resources/greenbar.gif" width="5" height="10" title="2"
alt="2"/></td><td class="ctr2" id="c11">100%</td><td class="bar" id="d12"/><td
class="ctr2" id="e12">n/a</td><td class="ctr1" id="f12">0</td><td class="ctr2"
id="g12">1</td><td class="ctr1" id="h12">0</td
><td class="ctr2" id="i12">1</td><td class="ctr1" id="j12">0</td><td
>class="ctr2" id="k12">1</td></tr><tr><td id="a11"><a
>href="NakagamiDistribution.java.html#L166"
>class="el_method">isSupportUpperBoundInclusive()</a></td><td class="bar"
>id="b13"><img src="../.resources/greenbar.gif" width="5" height="10"
>title="2" alt="2"/></td><td class="ctr2" id="c12">100%</td><td class="bar"
>id="d13"/><td class="ctr2" id="e13">n/a</td><td class="ctr1"
>id="f13">0</td><td class="ctr2" id="g13">1</td><td class="ctr1"
>id="h13">0</td><td class="ctr2" id="i13">1</td><td class="ctr1"
>id="j13">0</td><td class="ctr2" id="k13">1</td></tr><tr><td id="a9"><a
>href="NakagamiDistribution.java.html#L171"
>class="el_method">isSupportConnected()</a></td><td class="bar" id="b14"><img
>src="../.resources/greenbar.gif" width="5" height="10" title="2"
>alt="2"/></td><td class="ctr2" id="c13">100%</td><td class="bar"
>id="d14"/><td class="ctr2" id="e14">n/a</td><td class="ctr1"
>id="f14">0</td><td class="ctr2" id="g14">1</
td><td class="ctr1" id="h14">0</td><td class="ctr2" id="i14">1</td><td
class="ctr1" id="j14">0</td><td class="ctr2"
id="k14">1</td></tr></tbody></table><div class="footer"><span
class="right">Created with <a href="http://www.eclemma.org/jacoco";>JaCoCo</a>
0.7.0.201403182114</span></div></body></html>
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---
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websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.distribution/NakagamiDistribution.java.html
Sat Oct 18 20:10:38 2014
@@ -0,0 +1,175 @@
+<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML
1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";><html
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http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link
rel="stylesheet" href="../.resources/report.css" type="text/css"/><link
rel="shortcut icon" href="../.resources/report.gif"
type="image/gif"/><title>NakagamiDistribution.java</title><link
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type="text/javascript" src="../.resources/prettify.js"></script></head><body
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class="el_package">org.apache.commons.math3.distribution</a> > <span
class="el_source">NakagamiDistrib
ution.java</span></div><h1>NakagamiDistribution.java</h1><pre class="source
lang-java linenums">/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance
with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.commons.math3.distribution;
+
+import org.apache.commons.math3.exception.NotStrictlyPositiveException;
+import org.apache.commons.math3.exception.NumberIsTooSmallException;
+import org.apache.commons.math3.exception.util.LocalizedFormats;
+import org.apache.commons.math3.random.RandomGenerator;
+import org.apache.commons.math3.random.Well19937c;
+import org.apache.commons.math3.special.Gamma;
+import org.apache.commons.math3.util.FastMath;
+
+/**
+ * This class implements the Nakagami distribution.
+ *
+ * @see <a
href="http://en.wikipedia.org/wiki/Nakagami_distribution">Nakagami
Distribution (Wikipedia)</a>
+ *
+ * @since 3.4
+ */
+public class NakagamiDistribution extends AbstractRealDistribution {
+
+ /** Default inverse cumulative probability accuracy. */
+ public static final double DEFAULT_INVERSE_ABSOLUTE_ACCURACY = 1e-9;
+
+ /** Serializable version identifier. */
+ private static final long serialVersionUID = 20141003;
+
+ /** The shape parameter. */
+ private final double mu;
+ /** The scale parameter. */
+ private final double omega;
+ /** Inverse cumulative probability accuracy. */
+ private final double inverseAbsoluteAccuracy;
+
+ /**
+ * Build a new instance.
+ *
+ * @param mu shape parameter
+ * @param omega scale parameter (must be positive)
+ * @throws NumberIsTooSmallException if {@code mu < 0.5}
+ * @throws NotStrictlyPositiveException if {@code omega <= 0}
+ */
+ public NakagamiDistribution(double mu, double omega) {
+<span class="fc" id="L58"> this(mu, omega,
DEFAULT_INVERSE_ABSOLUTE_ACCURACY);</span>
+<span class="fc" id="L59"> }</span>
+
+ /**
+ * Build a new instance.
+ *
+ * @param mu shape parameter
+ * @param omega scale parameter (must be positive)
+ * @param inverseAbsoluteAccuracy the maximum absolute error in inverse
+ * cumulative probability estimates (defaults to {@link
#DEFAULT_INVERSE_ABSOLUTE_ACCURACY}).
+ * @throws NumberIsTooSmallException if {@code mu < 0.5}
+ * @throws NotStrictlyPositiveException if {@code omega <= 0}
+ */
+ public NakagamiDistribution(double mu, double omega, double
inverseAbsoluteAccuracy) {
+<span class="fc" id="L72"> this(new Well19937c(), mu, omega,
inverseAbsoluteAccuracy);</span>
+<span class="fc" id="L73"> }</span>
+
+ /**
+ * Build a new instance.
+ *
+ * @param rng Random number generator
+ * @param mu shape parameter
+ * @param omega scale parameter (must be positive)
+ * @param inverseAbsoluteAccuracy the maximum absolute error in inverse
+ * cumulative probability estimates (defaults to {@link
#DEFAULT_INVERSE_ABSOLUTE_ACCURACY}).
+ * @throws NumberIsTooSmallException if {@code mu < 0.5}
+ * @throws NotStrictlyPositiveException if {@code omega <= 0}
+ */
+ public NakagamiDistribution(RandomGenerator rng, double mu, double omega,
double inverseAbsoluteAccuracy) {
+<span class="fc" id="L87"> super(rng);</span>
+
+<span class="pc bpc" id="L89" title="1 of 2 branches missed."> if (mu
< 0.5) {</span>
+<span class="nc" id="L90"> throw new NumberIsTooSmallException(mu,
0.5, true);</span>
+ }
+<span class="pc bpc" id="L92" title="1 of 2 branches missed."> if
(omega <= 0) {</span>
+<span class="nc" id="L93"> throw new
NotStrictlyPositiveException(LocalizedFormats.NOT_POSITIVE_SCALE, omega);</span>
+ }
+
+<span class="fc" id="L96"> this.mu = mu;</span>
+<span class="fc" id="L97"> this.omega = omega;</span>
+<span class="fc" id="L98"> this.inverseAbsoluteAccuracy =
inverseAbsoluteAccuracy;</span>
+<span class="fc" id="L99"> }</span>
+
+ /**
+ * Access the shape parameter, {@code mu}.
+ *
+ * @return the shape parameter.
+ */
+ public double getShape() {
+<span class="fc" id="L107"> return mu;</span>
+ }
+
+ /**
+ * Access the scale parameter, {@code omega}.
+ *
+ * @return the scale parameter.
+ */
+ public double getScale() {
+<span class="fc" id="L116"> return omega;</span>
+ }
+
+ @Override
+ protected double getSolverAbsoluteAccuracy() {
+<span class="fc" id="L121"> return inverseAbsoluteAccuracy;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double density(double x) {
+<span class="fc bfc" id="L126" title="All 2 branches covered."> if (x
<= 0) {</span>
+<span class="fc" id="L127"> return 0.0;</span>
+ }
+<span class="fc" id="L129"> return 2.0 * FastMath.pow(mu, mu) /
(Gamma.gamma(mu) * FastMath.pow(omega, mu)) *</span>
+ FastMath.pow(x, 2 * mu - 1) * FastMath.exp(-mu * x * x /
omega);
+ }
+
+ /** {@inheritDoc} */
+ public double cumulativeProbability(double x) {
+<span class="fc" id="L135"> return Gamma.regularizedGammaP(mu, mu * x *
x / omega);</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getNumericalMean() {
+<span class="fc" id="L140"> return Gamma.gamma(mu + 0.5) /
Gamma.gamma(mu) * FastMath.sqrt(omega / mu);</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getNumericalVariance() {
+<span class="fc" id="L145"> double v = Gamma.gamma(mu + 0.5) /
Gamma.gamma(mu);</span>
+<span class="fc" id="L146"> return omega * (1 - 1 / mu * v * v);</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getSupportLowerBound() {
+<span class="fc" id="L151"> return 0;</span>
+ }
+
+ /** {@inheritDoc} */
+ public double getSupportUpperBound() {
+<span class="fc" id="L156"> return Double.POSITIVE_INFINITY;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportLowerBoundInclusive() {
+<span class="fc" id="L161"> return true;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportUpperBoundInclusive() {
+<span class="fc" id="L166"> return false;</span>
+ }
+
+ /** {@inheritDoc} */
+ public boolean isSupportConnected() {
+<span class="fc" id="L171"> return true;</span>
+ }
+
+}
+</pre><div class="footer"><span class="right">Created with <a
href="http://www.eclemma.org/jacoco";>JaCoCo</a>
0.7.0.201403182114</span></div></body></html>
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==============================================================================
---
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.fitting.leastsquares/EvaluationRmsChecker.html
(added)
+++
websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.fitting.leastsquares/EvaluationRmsChecker.html
Sat Oct 18 20:10:38 2014
@@ -0,0 +1 @@
+<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML
1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";><html
xmlns="http://www.w3.org/1999/xhtml"; lang="en"><head><meta
http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link
rel="stylesheet" href="../.resources/report.css" type="text/css"/><link
rel="shortcut icon" href="../.resources/report.gif"
type="image/gif"/><title>EvaluationRmsChecker</title><script
type="text/javascript" src="../.resources/sort.js"></script></head><body
onload="initialSort(['breadcrumb'])"><div class="breadcrumb"
id="breadcrumb"><span class="info"><a href="../.sessions.html"
class="el_session">Sessions</a></span><a href="../index.html"
class="el_report">Apache Commons Math</a> > <a href="index.html"
class="el_package">org.apache.commons.math3.fitting.leastsquares</a> > <span
class="el_class">EvaluationRmsChecker</span></div><h1>EvaluationRmsChecker</h1><table
class="coverage" cellspacing="0" id="cov
eragetable"><thead><tr><td class="sortable" id="a"
onclick="toggleSort(this)">Element</td><td class="down sortable bar" id="b"
onclick="toggleSort(this)">Missed Instructions</td><td class="sortable ctr2"
id="c" onclick="toggleSort(this)">Cov.</td><td class="sortable bar" id="d"
onclick="toggleSort(this)">Missed Branches</td><td class="sortable ctr2" id="e"
onclick="toggleSort(this)">Cov.</td><td class="sortable ctr1" id="f"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="g"
onclick="toggleSort(this)">Cxty</td><td class="sortable ctr1" id="h"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="i"
onclick="toggleSort(this)">Lines</td><td class="sortable ctr1" id="j"
onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="k"
onclick="toggleSort(this)">Methods</td></tr></thead><tfoot><tr><td>Total</td><td
class="bar">5 of 36</td><td class="ctr2">86%</td><td class="bar">0 of
4</td><td class="ctr2">100%</td><td class="ctr1">1</td><td class="
ctr2">5</td><td class="ctr1">2</td><td class="ctr2">9</td><td
class="ctr1">1</td><td class="ctr2">3</td></tr></tfoot><tbody><tr><td
id="a1"><a href="EvaluationRmsChecker.java.html#L46"
class="el_method">EvaluationRmsChecker(double)</a></td><td class="bar"
id="b0"><img src="../.resources/redbar.gif" width="27" height="10" title="5"
alt="5"/></td><td class="ctr2" id="c2">0%</td><td class="bar" id="d1"/><td
class="ctr2" id="e1">n/a</td><td class="ctr1" id="f0">1</td><td class="ctr2"
id="g1">1</td><td class="ctr1" id="h0">2</td><td class="ctr2" id="i2">2</td><td
class="ctr1" id="j0">1</td><td class="ctr2" id="k0">1</td></tr><tr><td
id="a0"><a href="EvaluationRmsChecker.java.html#L69"
class="el_method">converged(int, LeastSquaresProblem.Evaluation,
LeastSquaresProblem.Evaluation)</a></td><td class="bar" id="b1"><img
src="../.resources/greenbar.gif" width="120" height="10" title="22"
alt="22"/></td><td class="ctr2" id="c0">100%</td><td class="bar" id="d0"><img
src="../.resources/greenbar.
gif" width="120" height="10" title="4" alt="4"/></td><td class="ctr2"
id="e0">100%</td><td class="ctr1" id="f1">0</td><td class="ctr2"
id="g0">3</td><td class="ctr1" id="h1">0</td><td class="ctr2" id="i1">3</td><td
class="ctr1" id="j1">0</td><td class="ctr2" id="k1">1</td></tr><tr><td
id="a2"><a href="EvaluationRmsChecker.java.html#L60"
class="el_method">EvaluationRmsChecker(double, double)</a></td><td class="bar"
id="b2"><img src="../.resources/greenbar.gif" width="49" height="10" title="9"
alt="9"/></td><td class="ctr2" id="c1">100%</td><td class="bar" id="d2"/><td
class="ctr2" id="e2">n/a</td><td class="ctr1" id="f2">0</td><td class="ctr2"
id="g2">1</td><td class="ctr1" id="h2">0</td><td class="ctr2" id="i0">4</td><td
class="ctr1" id="j2">0</td><td class="ctr2"
id="k2">1</td></tr></tbody></table><div class="footer"><span
class="right">Created with <a href="http://www.eclemma.org/jacoco";>JaCoCo</a>
0.7.0.201403182114</span></div></body></html>
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websites/production/commons/content/proper/commons-math/jacoco/org.apache.commons.math3.fitting.leastsquares/EvaluationRmsChecker.java.html
Sat Oct 18 20:10:38 2014
@@ -0,0 +1,76 @@
+<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML
1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";><html
xmlns="http://www.w3.org/1999/xhtml"; lang="en"><head><meta
http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link
rel="stylesheet" href="../.resources/report.css" type="text/css"/><link
rel="shortcut icon" href="../.resources/report.gif"
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ionRmsChecker.java</span></div><h1>EvaluationRmsChecker.java</h1><pre
class="source lang-java linenums">/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance
with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.commons.math3.fitting.leastsquares;
+
+import
org.apache.commons.math3.fitting.leastsquares.LeastSquaresProblem.Evaluation;
+import org.apache.commons.math3.optim.ConvergenceChecker;
+import org.apache.commons.math3.util.Precision;
+
+/**
+ * Check if an optimization has converged based on the change in computed RMS.
+ *
+ * @since 3.4
+ */
+public class EvaluationRmsChecker implements
ConvergenceChecker<Evaluation> {
+
+ /** relative tolerance for comparisons. */
+ private final double relTol;
+ /** absolute tolerance for comparisons. */
+ private final double absTol;
+
+ /**
+ * Create a convergence checker for the RMS with the same relative and
absolute
+ * tolerance.
+ *
+ * <p>Convenience constructor for when the relative and absolute
tolerances are the
+ * same. Same as {@code new EvaluationRmsChecker(tol, tol)}.
+ *
+ * @param tol the relative and absolute tolerance.
+ * @see #EvaluationRmsChecker(double, double)
+ */
+ public EvaluationRmsChecker(final double tol) {
+<span class="nc" id="L46"> this(tol, tol);</span>
+<span class="nc" id="L47"> }</span>
+
+ /**
+ * Create a convergence checker for the RMS with a relative and absolute
tolerance.
+ *
+ * <p>The optimization has converged when the RMS of consecutive
evaluations are equal
+ * to within the given relative tolerance or absolute tolerance.
+ *
+ * @param relTol the relative tolerance.
+ * @param absTol the absolute tolerance.
+ * @see Precision#equals(double, double, double)
+ * @see Precision#equalsWithRelativeTolerance(double, double, double)
+ */
+<span class="fc" id="L60"> public EvaluationRmsChecker(final double relTol,
final double absTol) {</span>
+<span class="fc" id="L61"> this.relTol = relTol;</span>
+<span class="fc" id="L62"> this.absTol = absTol;</span>
+<span class="fc" id="L63"> }</span>
+
+ /** {@inheritDoc} */
+ public boolean converged(final int iteration,
+ final Evaluation previous,
+ final Evaluation current) {
+<span class="fc" id="L69"> final double prevRms =
previous.getRMS();</span>
+<span class="fc" id="L70"> final double currRms =
current.getRMS();</span>
+<span class="fc bfc" id="L71" title="All 4 branches covered."> return
Precision.equals(prevRms, currRms, this.absTol) ||</span>
+ Precision.equalsWithRelativeTolerance(prevRms, currRms,
this.relTol);
+ }
+
+}
+</pre><div class="footer"><span class="right">Created with <a
href="http://www.eclemma.org/jacoco";>JaCoCo</a>
0.7.0.201403182114</span></div></body></html>
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