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ReadInputException</h2>
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 title="class or interface in java.lang">String</a>&nbsp;msg,
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+<li><a href="#methods.inherited.from.class.java.lang.Throwable">Method</a></li>
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+<div class="subTitle">org.apache.taverna.commandline.exceptions</div>
+<h2 title="Class SaveResultsException" class="title">Class 
SaveResultsException</h2>
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+<div class="contentContainer">
+<ul class="inheritance">
+<li><a 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
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href="http://docs.oracle.com/javase/7/docs/api/java/lang/Throwable.html?is-external=true";
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href="http://docs.oracle.com/javase/7/docs/api/java/lang/String.html?is-external=true";
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+<meta name="date" content="2016-06-30">
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class="title">Uses of 
Class<br>org.apache.taverna.commandline.exceptions.DatabaseConfigurationException</h2>
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summary="Use table, listing packages, and an explanation">
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href="../../../../../../org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html"
 title="class in 
org.apache.taverna.commandline.exceptions">DatabaseConfigurationException</a></span><span
 class="tabEnd">&nbsp;</span></caption>
+<tr>
+<th class="colFirst" scope="col">Package</th>
+<th class="colLast" scope="col">Description</th>
+</tr>
+<tbody>
+<tr class="altColor">
+<td class="colFirst"><a 
href="#org.apache.taverna.commandline">org.apache.taverna.commandline</a></td>
+<td class="colLast">&nbsp;</td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><a 
href="#org.apache.taverna.commandline.data">org.apache.taverna.commandline.data</a></td>
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href="../../../../../../org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html"
 title="class in 
org.apache.taverna.commandline.exceptions">DatabaseConfigurationException</a> 
in <a 
href="../../../../../../org/apache/taverna/commandline/package-summary.html">org.apache.taverna.commandline</a></h3>
+<table class="useSummary" border="0" cellpadding="3" cellspacing="0" 
summary="Use table, listing methods, and an explanation">
+<caption><span>Methods in <a 
href="../../../../../../org/apache/taverna/commandline/package-summary.html">org.apache.taverna.commandline</a>
 that throw <a 
href="../../../../../../org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html"
 title="class in 
org.apache.taverna.commandline.exceptions">DatabaseConfigurationException</a></span><span
 class="tabEnd">&nbsp;</span></caption>
+<tr>
+<th class="colFirst" scope="col">Modifier and Type</th>
+<th class="colLast" scope="col">Method and Description</th>
+</tr>
+<tbody>
+<tr class="altColor">
+<td class="colFirst"><code>int</code></td>
+<td class="colLast"><span 
class="typeNameLabel">CommandLineTool.</span><code><span 
class="memberNameLink"><a 
href="../../../../../../org/apache/taverna/commandline/CommandLineTool.html#setupAndExecute--">setupAndExecute</a></span>()</code>&nbsp;</td>
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+<h3>Uses of <a 
href="../../../../../../org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html"
 title="class in 
org.apache.taverna.commandline.exceptions">DatabaseConfigurationException</a> 
in <a 
href="../../../../../../org/apache/taverna/commandline/data/package-summary.html">org.apache.taverna.commandline.data</a></h3>
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summary="Use table, listing methods, and an explanation">
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href="../../../../../../org/apache/taverna/commandline/data/package-summary.html">org.apache.taverna.commandline.data</a>
 that throw <a 
href="../../../../../../org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html"
 title="class in 
org.apache.taverna.commandline.exceptions">DatabaseConfigurationException</a></span><span
 class="tabEnd">&nbsp;</span></caption>
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+<th class="colLast" scope="col">Method and Description</th>
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+<td class="colLast"><span 
class="typeNameLabel">DatabaseConfigurationHandler.</span><code><span 
class="memberNameLink"><a 
href="../../../../../../org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#configureDatabase--">configureDatabase</a></span>()</code>&nbsp;</td>
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class="typeNameLabel">DatabaseConfigurationHandler.</span><code><span 
class="memberNameLink"><a 
href="../../../../../../org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#overrideDefaults--">overrideDefaults</a></span>()</code>&nbsp;</td>
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class="typeNameLabel">DatabaseConfigurationHandler.</span><code><span 
class="memberNameLink"><a 
href="../../../../../../org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#testDatabaseConnection--">testDatabaseConnection</a></span>()</code>&nbsp;</td>
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+<tr class="rowColor">
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+<td class="colLast"><span 
class="typeNameLabel">DatabaseConfigurationHandler.</span><code><span 
class="memberNameLink"><a 
href="../../../../../../org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#useOptions--">useOptions</a></span>()</code>&nbsp;</td>
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 title="class in 
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+<tr>
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+<td class="colLast">&nbsp;</td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><a 
href="#org.apache.taverna.commandline.data">org.apache.taverna.commandline.data</a></td>
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 title="class in 
org.apache.taverna.commandline.exceptions">InputMismatchException</a> in <a 
href="../../../../../../org/apache/taverna/commandline/package-summary.html">org.apache.taverna.commandline</a></h3>
+<table class="useSummary" border="0" cellpadding="3" cellspacing="0" 
summary="Use table, listing methods, and an explanation">
+<caption><span>Methods in <a 
href="../../../../../../org/apache/taverna/commandline/package-summary.html">org.apache.taverna.commandline</a>
 that throw <a 
href="../../../../../../org/apache/taverna/commandline/exceptions/InputMismatchException.html"
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org.apache.taverna.commandline.exceptions">InputMismatchException</a></span><span
 class="tabEnd">&nbsp;</span></caption>
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+<th class="colFirst" scope="col">Modifier and Type</th>
+<th class="colLast" scope="col">Method and Description</th>
+</tr>
+<tbody>
+<tr class="altColor">
+<td class="colFirst"><code>int</code></td>
+<td class="colLast"><span 
class="typeNameLabel">CommandLineTool.</span><code><span 
class="memberNameLink"><a 
href="../../../../../../org/apache/taverna/commandline/CommandLineTool.html#setupAndExecute--">setupAndExecute</a></span>()</code>&nbsp;</td>
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 title="class in 
org.apache.taverna.commandline.exceptions">InputMismatchException</a> in <a 
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summary="Use table, listing methods, and an explanation">
+<caption><span>Methods in <a 
href="../../../../../../org/apache/taverna/commandline/data/package-summary.html">org.apache.taverna.commandline.data</a>
 that throw <a 
href="../../../../../../org/apache/taverna/commandline/exceptions/InputMismatchException.html"
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org.apache.taverna.commandline.exceptions">InputMismatchException</a></span><span
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+<th class="colFirst" scope="col">Modifier and Type</th>
+<th class="colLast" scope="col">Method and Description</th>
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+<tbody>
+<tr class="altColor">
+<td class="colFirst"><code>void</code></td>
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class="typeNameLabel">InputsHandler.</span><code><span 
class="memberNameLink"><a 
href="../../../../../../org/apache/taverna/commandline/data/InputsHandler.html#checkProvidedInputs-java.util.Map-org.apache.taverna.commandline.options.CommandLineOptions-">checkProvidedInputs</a></span>(<a
 
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org.apache.taverna.scufl2.api.port">InputWorkflowPort</a>&gt;&nbsp;portMap,
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href="../../../../../../org/apache/taverna/commandline/options/CommandLineOptions.html"
 title="interface in 
org.apache.taverna.commandline.options">CommandLineOptions</a>&nbsp;options)</code>&nbsp;</td>
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