Dear Paul,we have happily been running the coot-Linux-x86_64-centos-5-gtk2-python build on our Scientific Linux 6.1 (RHEL-6 clone) machines. In particular, version 3607 has been working very well for quite some time now. Today I tried to upgrade to version 3965, using coot-0.7-pre-1-revision-3965-binary-Linux-x86_64-centos-5-python-gtk2.tar.gz
However this crashes after showing the coot logo: ...Good Afternoon Kay, Welcome to Coot. 0.7-pre-1 (revision 3965) [with guile 1.8.7 embedded] [with python 2.7.0 embedded] (set-display-intro-string "Good Afternoon Dikay, Welcome to Coot. 0.7-pre-1 (revision 3965) [with guile 1.8.7 embedded] [with python 2.7.0 embedded]")
Loading: mutate.py Loading: refmac.py Loading: libcheck.py Loading: gap.py Loading: fitting.py Loading: raster3d.py Loading: povray.py Loading: remote_control.py Loading: generic_objects.py Loading: ncs.py Loading: parse_pisa_xml.py Loading: cns2coot.py Loading: tips.py Loading: americanisms.py Loading: group_settings.py Loading: brute_lsqman.py Loading: coot_gui.py Coot Python Scripting GUI code found and loaded. Loading: tips_gui.py Loading: check_for_updates.py Loading: get_recent_pdbe.py Loading: shelx_extensions.py Loading: prodrg_import.py new prodrg_import.py Loading: clear_backup.py Loading: coot_toolbuttons.pyINFO:: loading preferences file /home/dikay/.coot-preferences/coot_preferences.py
Running python script /home/dikay/.coot-preferences/coot_preferences.py (set-filter-fileselection-filenames 1) (unset-sticky-sort-by-date) (set-colour-map-rotation-on-read-pdb 21.00) (set-colour-map-rotation-on-read-pdb-c-only-flag 1) (set-density-size 20.00) (set-swap-difference-map-colours 0) (set-colour-map-rotation-for-maps 14.00) (set-active-map-drag-flag 1) (set-idle-function-rotate-angle 1.00) (filter-fileselection-filenames-state) (get-active-map-drag-flag) (use-graphics-interface-state)
GThread-ERROR **: GThread system may only be initialized once. aborting.../usr/local/src/new/coot-Linux-x86_64-centos-5-gtk2-python/bin/coot: line 247: 4557 Aborted (core dumped) $coot_real $@
The same problem was reported on May 23, 2011 by Richard Birkinshaw, without resolution.
So is anybody successfully using the latest CentOS-5 x86_64 builds on CentOS-6 or SL-6 or RHEL6 ? And if so, what goes wrong in my case, and similarly for others, as reported?
thanks, Kay -- Kay Diederichs http://strucbio.biologie.uni-konstanz.de email: kay.diederi...@uni-konstanz.de Tel +49 7531 88 4049 Fax 3183 Fachbereich Biologie, Universität Konstanz, Box M647, D-78457 Konstanz This e-mail is digitally signed. If your e-mail client does not have the necessary capabilities, just ignore the attached signature "smime.p7s".
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