See <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/145/>
------------------------------------------ [...truncated 2859 lines...] A psi-mi-impl/src/main/resources/org/cytoscape/internal/psi_mi/plugin/plugin.props A psi-mi-impl/src/main/xsd AU psi-mi-impl/src/main/xsd/MIF25.xsd AU psi-mi-impl/src/main/xsd/MIF1.xsd A psi-mi-impl/pom.xml A psi-mi-impl/.settings A psi-mi-impl/.settings/org.eclipse.jdt.core.prefs A psi-mi-impl/.settings/org.maven.ide.eclipse.prefs A plugin-impl A plugin-impl/osgi.bnd A plugin-impl/src A plugin-impl/src/test A plugin-impl/src/test/java A plugin-impl/src/test/java/org A plugin-impl/src/test/java/org/cytoscape A plugin-impl/src/test/java/org/cytoscape/plugin A plugin-impl/src/test/java/org/cytoscape/plugin/internal A plugin-impl/src/test/java/org/cytoscape/plugin/internal/PluginLoaderTaskFactoryTest.java A plugin-impl/src/test/java/org/cytoscape/plugin/internal/CyPluginAdapterImplTest.java A plugin-impl/src/main A plugin-impl/src/main/java A plugin-impl/src/main/java/org A plugin-impl/src/main/java/org/cytoscape A plugin-impl/src/main/java/org/cytoscape/plugin A plugin-impl/src/main/java/org/cytoscape/plugin/internal A plugin-impl/src/main/java/org/cytoscape/plugin/internal/NotAPluginException.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginLoaderTaskFactory.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginStatus.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/CytoscapePlugin.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/InstallablePlugin.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginTracker.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginInfo.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/JarUtil.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/WebstartException.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginProperties.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginManagerTask.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/Category.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/CyPluginAdapterImpl.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginException.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginFileReader.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginVersionUtils.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/DownloadableType.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginManagerInquireTaskFactory.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/InvalidDownloadable.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/DownloadableInfo.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginLoaderTask.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ManagerUtil.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginManagerInquireTask.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/TrackerException.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ThemeInfo.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginXml.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/StartupMostlyFinished.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/CyActivator.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginManager.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/PluginInquireAction.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ManagerException.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/Installable.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/action A plugin-impl/src/main/java/org/cytoscape/plugin/internal/action/PluginManagerAction.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ui A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ui/PluginUpdateDialog.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ui/PluginUrlDialog.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ui/LicenseDialog.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ui/TreeNode.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ui/PluginIndex.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ui/TreeCellRenderer.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ui/PluginManageDialog.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/ui/ManagerModel.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/util A plugin-impl/src/main/java/org/cytoscape/plugin/internal/util/URLUtil.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/util/ZipUtil.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/util/IndeterminateProgressBar.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/util/FileUtil.java A plugin-impl/src/main/java/org/cytoscape/plugin/internal/DuplicatePluginClassException.java A plugin-impl/src/main/resources A plugin-impl/src/main/resources/META-INF A plugin-impl/src/main/resources/META-INF/spring A plugin-impl/src/main/resources/META-INF/spring/bundle-context-osgi.xml-legacy A plugin-impl/src/main/resources/META-INF/spring/bundle-context.xml-legacy A plugin-impl/src/main/resources/images AU plugin-impl/src/main/resources/images/alert-red.gif AU plugin-impl/src/main/resources/images/alert-red2.gif AU plugin-impl/src/main/resources/images/check-mark.gif A plugin-impl/pom.xml A webservice-impl A webservice-impl/osgi.bnd A webservice-impl/src A webservice-impl/src/test A webservice-impl/src/test/java A webservice-impl/src/main A webservice-impl/src/main/java A webservice-impl/src/main/java/org A webservice-impl/src/main/java/org/cytoscape A webservice-impl/src/main/java/org/cytoscape/webservice A webservice-impl/src/main/java/org/cytoscape/webservice/internal A webservice-impl/src/main/java/org/cytoscape/webservice/internal/task A webservice-impl/src/main/java/org/cytoscape/webservice/internal/task/ShowNetworkImportDialogAction.java A webservice-impl/src/main/java/org/cytoscape/webservice/internal/task/WebServiceEdgeContextMenuTaskFactory.java A webservice-impl/src/main/java/org/cytoscape/webservice/internal/task/WebServiceNodeContextMenuTaskFactory.java A webservice-impl/src/main/java/org/cytoscape/webservice/internal/task/WebServiceContextMenuTask.java A webservice-impl/src/main/java/org/cytoscape/webservice/internal/CyActivator.java A webservice-impl/src/main/java/org/cytoscape/webservice/internal/ui A webservice-impl/src/main/java/org/cytoscape/webservice/internal/ui/WebServiceContextMenuManager.java A webservice-impl/src/main/java/org/cytoscape/webservice/internal/ui/UnifiedNetworkImportDialog.java A webservice-impl/src/main/java/org/cytoscape/webservice/internal/ui/WebServiceContextMenu.java A webservice-impl/src/main/resources A webservice-impl/src/main/resources/META-INF A webservice-impl/src/main/resources/META-INF/spring A webservice-impl/src/main/resources/META-INF/spring/bundle-context-osgi.xml-legacy A webservice-impl/src/main/resources/META-INF/spring/bundle-context.xml-legacy A webservice-impl/src/main/resources/images AU webservice-impl/src/main/resources/images/networkImportIcon.png AU webservice-impl/src/main/resources/images/stock_internet-32.png A webservice-impl/pom.xml A model-impl A model-impl/impl A model-impl/impl/osgi.bnd A model-impl/impl/src A model-impl/impl/src/test A model-impl/impl/src/test/java A model-impl/impl/src/test/java/org A model-impl/impl/src/test/java/org/cytoscape A model-impl/impl/src/test/java/org/cytoscape/model A model-impl/impl/src/test/java/org/cytoscape/model/IdentifiableTest.java A model-impl/impl/src/test/java/org/cytoscape/model/CyEdgeTest.java A model-impl/impl/src/test/java/org/cytoscape/model/CyNodeTest.java A model-impl/impl/src/test/java/org/cytoscape/model/CyTableTest.java A model-impl/impl/src/test/java/org/cytoscape/model/subnetwork A model-impl/impl/src/test/java/org/cytoscape/model/subnetwork/CyRootNetworkCyNetworkTest.java A model-impl/impl/src/test/java/org/cytoscape/model/subnetwork/CySubNetworkTest.java A model-impl/impl/src/test/java/org/cytoscape/model/subnetwork/CySubNetworkCyNetworkTest.java A model-impl/impl/src/test/java/org/cytoscape/model/subnetwork/CyRootNetworkTest.java A model-impl/impl/src/test/java/org/cytoscape/model/subnetwork/CySubNetworkCyTableManagerTest.java A model-impl/impl/src/test/java/org/cytoscape/model/TableTestSupport.java A model-impl/impl/src/test/java/org/cytoscape/model/TableTestSupportTest.java A model-impl/impl/src/test/java/org/cytoscape/model/CyNetworkTest.java A model-impl/impl/src/test/java/org/cytoscape/model/NetworkTestSupport.java A model-impl/impl/src/test/java/org/cytoscape/model/NetworkTestSupportTest.java AU model-impl/impl/src/test/java/org/cytoscape/model/CyNetworkTableManagerTest.java A model-impl/impl/src/test/java/org/cytoscape/model/GraphObjectTest.java A model-impl/impl/src/test/java/org/cytoscape/model/internal A model-impl/impl/src/test/java/org/cytoscape/model/internal/tsort A model-impl/impl/src/test/java/org/cytoscape/model/internal/tsort/TopologicalSortTest.java A model-impl/impl/src/test/java/org/cytoscape/model/TestCyNetworkFactory.java A model-impl/impl/src/test/java/org/cytoscape/model/CyTableManagerTest.java A model-impl/impl/src/main A model-impl/impl/src/main/java A model-impl/impl/src/main/java/org A model-impl/impl/src/main/java/org/cytoscape A model-impl/impl/src/main/java/org/cytoscape/model A model-impl/impl/src/main/java/org/cytoscape/model/internal A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyNetworkFactoryImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/ArrayGraph.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyTableManagerImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyNetworkManagerImpl.java AU model-impl/impl/src/main/java/org/cytoscape/model/internal/VirtualColumnInfoImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyRootNetworkFactoryImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyNodeImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/VirtualColumn.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyTableImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/EdgePointer.java AU model-impl/impl/src/main/java/org/cytoscape/model/internal/CyTableMetadataImpl.java AU model-impl/impl/src/main/java/org/cytoscape/model/internal/CyNetworkTableManagerImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/ArraySubGraph.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyColumnImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CySubNodeImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/AttribTopoGraphNode.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/EqnSupport.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyEdgeImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/NodePointer.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyTableEntryImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyActivator.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/tsort A model-impl/impl/src/main/java/org/cytoscape/model/internal/tsort/TopologicalSort.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/tsort/TopoGraphNode.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CySubEdgeImpl.java A model-impl/impl/src/main/java/org/cytoscape/model/internal/CyTableFactoryImpl.java A model-impl/impl/src/main/javadoc A model-impl/impl/src/main/javadoc/org A model-impl/impl/src/main/javadoc/org/cytoscape A model-impl/impl/src/main/javadoc/org/cytoscape/model A model-impl/impl/src/main/javadoc/org/cytoscape/model/subnetwork A model-impl/impl/src/main/javadoc/org/cytoscape/model/subnetwork/package.html A model-impl/impl/src/main/javadoc/org/cytoscape/model/events A model-impl/impl/src/main/javadoc/org/cytoscape/model/events/package.html A model-impl/impl/src/main/javadoc/org/cytoscape/model/package.html A model-impl/impl/src/main/resources A model-impl/impl/src/main/resources/META-INF A model-impl/impl/src/main/resources/META-INF/spring A model-impl/impl/src/main/resources/META-INF/spring/bundle-context-osgi.xml-legacy A model-impl/impl/src/main/resources/META-INF/spring/bundle-context.xml-legacy A model-impl/impl/src/main/resources/readme.txt A model-impl/impl/pom.xml A model-impl/performance A model-impl/performance/baseline.xml A model-impl/performance/src A model-impl/performance/src/test ERROR: Failed to check out http://chianti.ucsd.edu/svn/core3/impl/trunk org.tmatesoft.svn.core.SVNException: svn: REPORT /svn/!svn/vcc/default failed at org.tmatesoft.svn.core.internal.io.dav.http.HTTPConnection.request(HTTPConnection.java:291) at org.tmatesoft.svn.core.internal.io.dav.http.HTTPConnection.request(HTTPConnection.java:276) at org.tmatesoft.svn.core.internal.io.dav.http.HTTPConnection.request(HTTPConnection.java:264) at org.tmatesoft.svn.core.internal.io.dav.DAVConnection.doReport(DAVConnection.java:266) at org.tmatesoft.svn.core.internal.io.dav.DAVRepository.runReport(DAVRepository.java:1263) at org.tmatesoft.svn.core.internal.io.dav.DAVRepository.update(DAVRepository.java:820) at org.tmatesoft.svn.core.wc.SVNUpdateClient.update(SVNUpdateClient.java:564) at org.tmatesoft.svn.core.wc.SVNUpdateClient.doCheckout(SVNUpdateClient.java:922) at hudson.scm.subversion.CheckoutUpdater$1.perform(CheckoutUpdater.java:90) at hudson.scm.subversion.WorkspaceUpdater$UpdateTask.delegateTo(WorkspaceUpdater.java:136) at hudson.scm.SubversionSCM$CheckOutTask.perform(SubversionSCM.java:773) at hudson.scm.SubversionSCM$CheckOutTask.invoke(SubversionSCM.java:754) at hudson.scm.SubversionSCM$CheckOutTask.invoke(SubversionSCM.java:738) at hudson.FilePath.act(FilePath.java:785) at hudson.FilePath.act(FilePath.java:767) at hudson.scm.SubversionSCM.checkout(SubversionSCM.java:731) at hudson.scm.SubversionSCM.checkout(SubversionSCM.java:676) at hudson.model.AbstractProject.checkout(AbstractProject.java:1193) at hudson.model.AbstractBuild$AbstractRunner.checkout(AbstractBuild.java:566) at hudson.model.AbstractBuild$AbstractRunner.run(AbstractBuild.java:454) at hudson.model.Run.run(Run.java:1403) at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:478) at hudson.model.ResourceController.execute(ResourceController.java:88) at hudson.model.Executor.run(Executor.java:230) Caused by: org.tmatesoft.svn.core.SVNErrorMessage: svn: REPORT /svn/!svn/vcc/default failed at org.tmatesoft.svn.core.SVNErrorMessage.create(SVNErrorMessage.java:200) at org.tmatesoft.svn.core.SVNErrorMessage.create(SVNErrorMessage.java:146) at org.tmatesoft.svn.core.SVNErrorMessage.create(SVNErrorMessage.java:89) ... 24 more Caused by: org.tmatesoft.svn.core.SVNException: svn: REPORT request failed on '/svn/!svn/vcc/default' svn: Processing REPORT request response failed: XML document structures must start and end within the same entity. (/svn/!svn/vcc/default) at org.tmatesoft.svn.core.internal.wc.SVNErrorManager.error(SVNErrorManager.java:64) at org.tmatesoft.svn.core.internal.wc.SVNErrorManager.error(SVNErrorManager.java:51) at org.tmatesoft.svn.core.internal.io.dav.http.HTTPConnection._request(HTTPConnection.java:644) at org.tmatesoft.svn.core.internal.io.dav.http.HTTPConnection.request(HTTPConnection.java:285) ... 23 more Caused by: org.tmatesoft.svn.core.SVNErrorMessage: svn: REPORT request failed on '/svn/!svn/vcc/default' at org.tmatesoft.svn.core.SVNErrorMessage.create(SVNErrorMessage.java:200) at org.tmatesoft.svn.core.internal.io.dav.http.HTTPConnection._request(HTTPConnection.java:642) ... 24 more Caused by: org.tmatesoft.svn.core.SVNErrorMessage: svn: Processing REPORT request response failed: XML document structures must start and end within the same entity. (/svn/!svn/vcc/default) at org.tmatesoft.svn.core.SVNErrorMessage.create(SVNErrorMessage.java:200) at org.tmatesoft.svn.core.SVNErrorMessage.create(SVNErrorMessage.java:181) at org.tmatesoft.svn.core.SVNErrorMessage.create(SVNErrorMessage.java:133) at org.tmatesoft.svn.core.internal.io.dav.http.HTTPConnection.readData(HTTPConnection.java:767) at org.tmatesoft.svn.core.internal.io.dav.http.HTTPConnection.readData(HTTPConnection.java:719) at org.tmatesoft.svn.core.internal.io.dav.http.HTTPRequest.dispatch(HTTPRequest.java:216) at org.tmatesoft.svn.core.internal.io.dav.http.HTTPConnection._request(HTTPConnection.java:364) ... 24 more Skipping sonar analysis due to snapshot dependency build trigger -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. 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