See <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/145/changes>
Changes: [slotia] Renaming of "plugin" to "app". This entails renaming "plugin" packages to "app" and updating references to the app-api to reflect its changes. Apps (i.e., plugins) must now have app.props instead of plugin.props. [slotia] Fixed collisions in pom.xml ------------------------------------------ [...truncated 6649 lines...] [INFO] Writing OBR metadata [INFO] Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml [INFO] --- maven-deploy-plugin:2.7:deploy (default-deploy) @ ding-customgraphics-manager-impl --- Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 22.7 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/ding-customgraphics-manager-impl-3.0.0-alpha8-20111207.081128-266.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/ding-customgraphics-manager-impl-3.0.0-alpha8-20111207.081128-266.jar (47 KB at 397.5 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/ding-customgraphics-manager-impl-3.0.0-alpha8-20111207.081128-266.pom Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/ding-customgraphics-manager-impl-3.0.0-alpha8-20111207.081128-266.pom (3 KB at 43.5 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/maven-metadata.xml (464 B at 11.9 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 22.2 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/maven-metadata.xml (464 B at 11.6 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/ding-customgraphics-manager-impl-3.0.0-alpha8-20111207.081128-266-sources.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/ding-customgraphics-manager-impl-3.0.0-alpha8-20111207.081128-266-sources.jar (22 KB at 401.2 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 17.6 KB/sec) [INFO] [INFO] Remote OBR update disabled (enable with -DremoteOBR) [INFO] --- maven-bundle-plugin:2.3.4:deploy (default-deploy) @ ding-customgraphics-manager-impl --- [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/ding-customgraphics-manager-impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$ding-customgraphics-manager-impl/builds/2011-12-07_03-02-52/archive/org.cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-SNAPSHOT/ding-customgraphics-manager-impl-3.0.0-alpha8-SNAPSHOT.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/ding-customgraphics-manager-impl/target/ding-customgraphics-manager-impl-3.0.0-alpha8-SNAPSHOT.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$ding-customgraphics-manager-impl/builds/2011-12-07_03-02-52/archive/org.cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-20111207.081128-266/ding-customgraphics-manager-impl-3.0.0-alpha8-20111207.081128-266.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/ding-customgraphics-manager-impl/target/ding-customgraphics-manager-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$ding-customgraphics-manager-impl/builds/2011-12-07_03-02-52/archive/org.cytoscape/ding-customgraphics-manager-impl/3.0.0-alpha8-20111207.081128-266/ding-customgraphics-manager-impl-3.0.0-alpha8-20111207.081128-266-sources.jar [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building io-impl-parent 3.0.0-alpha8-SNAPSHOT [INFO] ------------------------------------------------------------------------ ignoring exception during new ExecutedMojo null [INFO] [INFO] --- maven-source-plugin:2.1.2:jar (attach-sources) @ io-impl-parent --- [INFO] [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/pom.xml> to /opt/tomcat-home/.m2/repository/org/cytoscape/io-impl-parent/3.0.0-alpha8-SNAPSHOT/io-impl-parent-3.0.0-alpha8-SNAPSHOT.pom [INFO] --- maven-install-plugin:2.3.1:install (default-install) @ io-impl-parent --- [INFO] Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (622 B at 25.3 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-alpha8-SNAPSHOT/io-impl-parent-3.0.0-alpha8-20111207.081129-212.pom [INFO] --- maven-deploy-plugin:2.5:deploy (default-deploy) @ io-impl-parent --- Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-alpha8-SNAPSHOT/io-impl-parent-3.0.0-alpha8-20111207.081129-212.pom (6 KB at 76.1 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/maven-metadata.xml (294 B at 9.3 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (622 B at 8.8 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/maven-metadata.xml (294 B at 4.1 KB/sec) [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$io-impl-parent/builds/2011-12-07_03-02-52/archive/org.cytoscape/io-impl-parent/3.0.0-alpha8-SNAPSHOT/io-impl-parent-3.0.0-alpha8-SNAPSHOT.pom [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.io-impl [org.cytoscape.io.internal] 3.0.0-alpha8-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-jaxb2-plugin:0.7.4:generate (vizmap) @ io-impl --- [INFO] Started execution. [INFO] JAXB API is loaded from the [jar:file:/usr/lib/jvm/java-6-openjdk/jre/lib/rt.jar!]. [INFO] Detected JAXB API version [2.1]. [INFO] pluginArtifacts:[org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.7.4:, org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-raw:jar:0.7.4:compile, org.codehaus.plexus:plexus-utils:jar:1.1:compile, junit:junit:jar:4.8.1:compile, org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1:compile, org.sonatype.plexus:plexus-build-api:jar:0.0.6:compile, com.sun.xml.bind:jaxb-impl:jar:2.1.13:compile, javax.xml.bind:jaxb-api:jar:2.1:compile, javax.xml.stream:stax-api:jar:1.0-2:compile, javax.activation:activation:jar:1.1:compile, org.jvnet.jaxb2_commons:jaxb2-basics-jaxb-xjc:jar:2.1.13.MR2:compile, com.sun.codemodel:codemodel:jar:2.3:compile, com.sun.xml.dtd-parser:dtd-parser:jar:1.1:compile, com.sun.istack:istack-commons-tools:jar:2.2.MR1:compile, org.apache.ant:ant:jar:1.7.0:compile, org.apache.ant:ant-launcher:jar:1.7.0:compile, relaxngDatatype:relaxngDatatype:jar:20020414:compile, com.sun.org.apache.xml.internal:resolver:jar:20050927:compile, org.kohsuke.rngom:rngom:jar:20100718:compile, com.sun.xsom:xsom:jar:20100725:compile, sun.jdk:tools:jar:1.5.0:system] [INFO] schemaLanguage:null [INFO] schemaDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/src/main/resources/xsd> [INFO] schemaIncludes:[Ljava.lang.String;@155f9d8 [INFO] schemaExcludes:null [INFO] bindingDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/src/main/resources/xsd> [INFO] bindingIncludes:[Ljava.lang.String;@185e2f3 [INFO] bindingExcludes:null [INFO] disableDefaultExcludes:false [INFO] catalog:null [INFO] catalogResolver:com.sun.org.apache.xml.internal.resolver.tools.CatalogResolver [INFO] generatePackage:org.cytoscape.io.internal.util.vizmap.model [INFO] generateDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/target/generated-sources/xjc> [INFO] readOnly:false [INFO] extension:false [INFO] strict:true [INFO] writeCode:true [INFO] verbose:true [INFO] debug:false [INFO] args:[] [INFO] forceRegenerate:false [INFO] removeOldOutput:false [INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties] [INFO] otherDepends:null [INFO] episodeFile:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/target/generated-sources/xjc/META-INF/sun-jaxb.episode> [INFO] episode:true [INFO] classpathElements:[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/target/classes]> [INFO] plugins:null [INFO] episodes:null [INFO] xjcPlugins:null [INFO] episodes:null [INFO] specVersion:2.1 [INFO] schemaFiles (calculated):[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/src/main/resources/xsd/vizmap.xsd]> [INFO] bindingFiles (calculated):[] [INFO] xjcPluginArtifacts (resolved):[] [INFO] xjcPluginFiles (resolved):[] [INFO] xjcPluginURLs (resolved):[] [INFO] episodeArtifacts (resolved):[] [INFO] episodeFiles (resolved):[] [INFO] The schemaLanguage setting was not defined, assuming 'AUTODETECT'. Using java.util.ServiceLoader [INFO] Checking up-to-date depends [[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/src/main/resources/xsd/vizmap.xsd,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/pom.xml]].> [INFO] Checking up-to-date produces [[]]. [INFO] Depends timestamp [1323244955000], produces timestamp [null]. [INFO] Parsing input schema(s)... [INFO] Compiling input schema(s)... [INFO] Writing output to [<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/target/generated-sources/xjc].> [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/AttributeType.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/ContinuousMapping.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/ContinuousMappingPoint.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/Dependency.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/DiscreteMapping.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/DiscreteMappingEntry.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/Edge.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/Network.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/Node.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/ObjectFactory.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/PassthroughMapping.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/VisualProperty.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/VisualStyle.java [INFO] XJC writing: org/cytoscape/io/internal/util/vizmap/model/Vizmap.java [INFO] Finished execution. [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 3 resources [INFO] Copying 0 resource [INFO] Copying 1 resource [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ io-impl --- [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ io-impl --- [INFO] Compiling 166 source files to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/target/classes> [INFO] ------------------------------------------------------------- [ERROR] COMPILATION ERROR : [INFO] ------------------------------------------------------------- [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/src/main/java/org/cytoscape/io/internal/write/session/SessionWriterImpl.java>:[391,49] cannot find symbol symbol : method getAppFileListMap() location: class org.cytoscape.session.CySession [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/src/main/java/org/cytoscape/io/internal/read/session/AbstractSessionReader.java>:[136,46] cannot find symbol symbol : method appFileListMap(java.util.Map<java.lang.String,java.util.List<java.io.File>>) location: class org.cytoscape.session.CySession.Builder [INFO] 2 errors [INFO] ------------------------------------------------------------- [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/io-impl/impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$io-impl/builds/2011-12-07_03-02-52/archive/org.cytoscape/io-impl/3.0.0-alpha8-SNAPSHOT/io-impl-3.0.0-alpha8-SNAPSHOT.pom [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Cytoscape Implementation Parent Project POM ....... SUCCESS [5.004s] [INFO] org.cytoscape.biopax-impl [org.cytoscape.biopax] .. SUCCESS [19.140s] [INFO] Command Executor .................................. SUCCESS [3.253s] [INFO] org.cytoscape.equations-impl ...................... SUCCESS [9.065s] [INFO] model-impl-parent ................................. SUCCESS [0.516s] [INFO] org.cytoscape.model-impl .......................... SUCCESS [14.547s] [INFO] viewmodel-impl-parent ............................. SUCCESS [0.361s] [INFO] org.cytoscape.viewmodel-impl ...................... SUCCESS [4.493s] [INFO] Ding Implementation Parent Pom .................... SUCCESS [0.399s] [INFO] org.cytoscape.util-intr ........................... SUCCESS [4.500s] [INFO] org.cytoscape.spacial ............................. SUCCESS [8.049s] [INFO] org.cytoscape.graph-render ........................ SUCCESS [6:20.909s] [INFO] org.cytoscape.ding-presentation-impl .............. SUCCESS [13.679s] [INFO] org.cytoscape.core-task-impl ...................... SUCCESS [22.332s] [INFO] org.cytoscape.cpath2-impl [org.cytoscape.cpath2] .. SUCCESS [11.068s] [INFO] org.cytoscape.ding-customgraphics-manager-impl .... SUCCESS [4.533s] [INFO] io-impl-parent .................................... SUCCESS [0.476s] [INFO] org.cytoscape.io-impl [org.cytoscape.io.internal] . FAILURE [2.632s] [INFO] event-impl-parent ................................. SKIPPED [INFO] org.cytoscape.event-impl .......................... SKIPPED [INFO] org.cytoscape.layout-impl ......................... SKIPPED [INFO] org.cytoscape.ding-impl-performance-debug ......... SKIPPED [INFO] org.cytoscape.editor-impl ......................... SKIPPED [INFO] org.cytoscape.equations-functions-impl ............ SKIPPED [INFO] org.cytoscape.event-impl-it ....................... SKIPPED [INFO] org.cytoscape.filter-impl [org.cytoscape.filter.internal] SKIPPED [INFO] GraphML Reader and Writer for Cytoscape 3 ......... SKIPPED [INFO] org.cytoscape.io-impl-performance ................. SKIPPED [INFO] org.cytoscape.layout-cytoscape-impl [csapps.layout] SKIPPED [INFO] org.cytoscape.layout-jgraph-impl [csapps.layout] .. SKIPPED [INFO] org.cytoscape.layout-prefuse-impl [org.cytoscape.prefuse.layouts.internal] SKIPPED [INFO] org.cytoscape.linkout-impl [org.cytoscape.linkout.internal] SKIPPED [INFO] org.cytoscape.log-swing-impl [org.cytoscape.log.internal] SKIPPED [INFO] Manual Layout ..................................... SKIPPED [INFO] NetworkAnalyzer ................................... SKIPPED [INFO] Advanced Network Merge ............................ SKIPPED [INFO] org.cytoscape.app-impl ............................ SKIPPED [INFO] org.cytoscape.presentation-impl [org.cytoscape.view.presentation.internal] SKIPPED [INFO] org.cytoscape.property.internal ................... SKIPPED [INFO] org.cytoscape.psi-mi-impl [org.cytoscape.psi_mi.internal] SKIPPED [INFO] org.cytoscape.sbml-impl [org.cytoscape.sbml.internal] SKIPPED [INFO] org.cytoscape.search-impl [org.cytoscape.search.internal] SKIPPED [INFO] org.cytoscape.session-impl ........................ SKIPPED [INFO] Cytoscape Swing Application Impl .................. SKIPPED [INFO] Cytoscape Table Browser Implementation ............ SKIPPED [INFO] org.cytoscape.table-import-impl [org.cytoscape.tableimport.internal] SKIPPED [INFO] org.cytoscape.vizmap-gui-impl ..................... SKIPPED [INFO] vizmap-impl-parent ................................ SKIPPED [INFO] org.cytoscape.view.vizmap-impl .................... SKIPPED [INFO] org.cytoscape.io.webservice-biomart-client-impl [org.cytoscape.io.webservice.biomart] SKIPPED [INFO] org.cytoscape.webservice-impl [org.cytoscape.webservice.internal] SKIPPED [INFO] org.cytoscape.webservice-ncbi-client-impl [org.cytoscape.webservice.ncbi] SKIPPED [INFO] work-swing-impl-parent ............................ SKIPPED [INFO] org.cytoscape.work-swing-impl ..................... SKIPPED [INFO] org.cytoscape.application-impl .................... SKIPPED [INFO] org.cytoscape.webservice-psicquic-client-impl [org.cytoscape.webservice.psicquic] SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 8:34.638s [INFO] Finished at: Wed Dec 07 03:11:32 GMT-05:00 2011 [INFO] Final Memory: 56M/133M [INFO] ------------------------------------------------------------------------ Waiting for Jenkins to finish collecting data mavenExecutionResult exceptions not empty message : Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) on project io-impl: Compilation failure cause : Compilation failure Stack trace : org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) on project io-impl: Compilation failure at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:616) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158) at hudson.maven.Maven3Builder.call(Maven3Builder.java:112) at hudson.maven.Maven3Builder.call(Maven3Builder.java:70) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:287) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334) at java.util.concurrent.FutureTask.run(FutureTask.java:166) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:636) Caused by: org.apache.maven.plugin.CompilationFailureException: Compilation failure at org.apache.maven.plugin.AbstractCompilerMojo.execute(AbstractCompilerMojo.java:656) at org.apache.maven.plugin.CompilerMojo.execute(CompilerMojo.java:128) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209) ... 27 more Sending e-mails to: [email protected] channel stopped -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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