Sorry Dr. Bangerth,
I have to correct the previous email (tested by someone else while I was in
sitting in a class):
I do find the file /usr/include/trilinos/TrilinosConfig.cmake, where
SET(Trilinos_LIBRARIES
"trilinos_msqutil;trilinos_mesquite;trilinos_pytrilinos;trilinos_ctrilinos;trilinos_moochothyra;trilinos_moocho;trilinos_rythmos;trilinos_moertel;trilinos_locathyra;trilinos_locaepetra;trilinos_loca;trilinos_noxthyra;trilinos_noxepetra;trilinos_nox;trilinos_intrepid;trilinos_ModeLaplace;trilinos_anasaziepetra;trilinos_anasazi;trilinos_fei_test_utils;trilinos_fei_trilinos;trilinos_fei_base;trilinos_stratimikos;trilinos_stratimikosbelos;trilinos_stratimikosaztecoo;trilinos_stratimikosamesos;trilinos_stratimikosml;trilinos_stratimikosifpack;trilinos_tifpack;trilinos_belostpetra;trilinos_belosepetra;trilinos_belos;trilinos_ml;trilinos_komplex;trilinos_ifpack;trilinos_pamgen_extras;trilinos_pamgen;trilinos_amesos;trilinos_galeri;trilinos_aztecoo;trilinos_dpliris;trilinos_isorropia;trilinos_optipack;trilinos_thyratpetra;trilinos_thyraepetraext;trilinos_thyraepetra;trilinos_thyra;trilinos_epetraext;trilinos_tpetrainout;trilinos_tpetra;trilinos_triutils;trilinos_globipack;trilinos_shards;trilinos_zoltan;trilinos_epetra;trilinos_kokkoslinalg;trilinos_kokkosnodeapi;trilinos_kokkos;trilinos_rtop;trilinos_sacado;trilinos_tpi;trilinos_teuchos")
now when I try
./configure --with-umfpack-include=/usr/include/suitesparse
--with-umfpack-libs=/usr/lib --with-petsc=/usr/lib/petscdir/3.1
--with-petsc-arch=linux-gnu-c-opt --enable-mpi --disable-threads
--with-trilinos-include=/usr/include/trilinos --with-trilinos-libs=/usr/lib
DEAL_II_TRILINOS_INCDIR=/usr/include/trilinos
but I still have the same linking errors by still looking for
libtrilinos_trilinos_xxx.so.
Is the way I set DEAL_II_TRILINOS_INCDIR correct? I suppose this variable is
set by --with-trilinos-include=/usr/include/trilinos or it is a separate
one?
Sincerely,
Jichao
*Jichao Yin*
Email: [email protected]
LinkedIn: http://www.linkedin.com/in/jichao
On Mon, Oct 17, 2011 at 12:23 PM, Jichao Yin <[email protected]> wrote:
> I did a search by
>
> locate TrilinosConfig.cmake
>
> The file doesn't exist. Then I guess deal.II takes by
> default /usr/lib/libtrilinos_trilinos_msqutil.so?
> What are the default libtrilinos names of other linux distr like
> opensuse/fedora?
>
> Sincerely,
> Jichao
>
> *Jichao Yin*
> Email: [email protected]
> LinkedIn: http://www.linkedin.com/in/jichao
>
> On Mon, Oct 17, 2011 at 11:28 AM, Wolfgang Bangerth <
> [email protected]> wrote:
>
>>
>> > Now the compilation is okay but linking failed because of library names
>> are
>> > different:
>> >
>> > g++: error: /usr/lib/*libtrilinos_trilinos_msqutil.so*: No such file or
>> > directory
>> > ...
>> > the system installed lib names existing are:
>> > */usr/lib/libtrilinos_msqutil.so*
>> > ...
>> >
>> > I need create soft links to make it available to deal.II settings,
>> > wondering why the naming is so long, maybe that is because of trilinos
>> > itself but debian made it simple.
>>
>> We get the list of Trilinos libraries out of a file called either
>> $DEAL_II_TRILINOS_LIBDIR/cmake/Trilinos/TrilinosConfig.cmake
>> or
>> $DEAL_II_TRILINOS_INCDIR/TrilinosConfig.cmake
>> with an appropriate value for $DEAL_II_TRILINOS_INCDIR. Can you check
>> whether
>> you have this file? If so, it should contain the definition of a variable
>> called Trilinos_LIBRARIES that has a list of all the Trilinos libraries
>> that
>> we need to link with. I imagine it has a trilinos_trilinos_msqutil. If the
>> corresponding /usr/lib/libtrilinos_trilinos_msqutil.so does not exist,
>> then
>> that's a bug in Trilinos and/or Debian...
>>
>> Best
>> W.
>>
>> -------------------------------------------------------------------------
>> Wolfgang Bangerth email: [email protected]
>> www: http://www.math.tamu.edu/~bangerth/
>>
>
>
##############################################################################
#
# CMake variable for use by Trilinos clients.
#
# Do not edit: This file was generated automatically by CMake.
#
##############################################################################
## ---------------------------------------------------------------------------
## Compilers used by Trilinos build
## ---------------------------------------------------------------------------
SET(Trilinos_CXX_COMPILER "/usr/bin/mpic++")
SET(Trilinos_C_COMPILER "/usr/bin/mpicc")
SET(Trilinos_Fortran_COMPILER "/usr/bin/mpif77")
## ---------------------------------------------------------------------------
## Compiler flags used by Trilinos build
## ---------------------------------------------------------------------------
SET(Trilinos_CXX_COMPILER_FLAGS " -g -fPIC -O2 -g -O0")
SET(Trilinos_C_COMPILER_FLAGS " -g -fPIC -O2 -g -O0")
SET(Trilinos_Fortran_COMPILER_FLAGS " -g -fPIC -O2 -g")
## Extra link flags (e.g., specification of fortran libraries)
SET(Trilinos_EXTRA_LD_FLAGS "")
## This is the command-line entry used for setting rpaths. In a build
## with static libraries it will be empty.
SET(Trilinos_SHARED_LIB_RPATH_COMMAND "-Wl,-rpath,/usr/lib")
SET(Trilinos_BUILD_SHARED_LIBS "ON")
SET(Trilinos_LINKER /usr/bin/ld)
SET(Trilinos_AR /usr/bin/ar)
## ---------------------------------------------------------------------------
## Set library specifications and paths
## ---------------------------------------------------------------------------
## The project version number
SET(Trilinos_VERSION "10.4.0")
## The project include file directories.
SET(Trilinos_INCLUDE_DIRS "/usr/include/trilinos")
## The project library directories.
SET(Trilinos_LIBRARY_DIRS "/usr/lib")
## The project libraries.
SET(Trilinos_LIBRARIES "trilinos_msqutil;trilinos_mesquite;trilinos_pytrilinos;trilinos_ctrilinos;trilinos_moochothyra;trilinos_moocho;trilinos_rythmos;trilinos_moertel;trilinos_locathyra;trilinos_locaepetra;trilinos_loca;trilinos_noxthyra;trilinos_noxepetra;trilinos_nox;trilinos_intrepid;trilinos_ModeLaplace;trilinos_anasaziepetra;trilinos_anasazi;trilinos_fei_test_utils;trilinos_fei_trilinos;trilinos_fei_base;trilinos_stratimikos;trilinos_stratimikosbelos;trilinos_stratimikosaztecoo;trilinos_stratimikosamesos;trilinos_stratimikosml;trilinos_stratimikosifpack;trilinos_tifpack;trilinos_belostpetra;trilinos_belosepetra;trilinos_belos;trilinos_ml;trilinos_komplex;trilinos_ifpack;trilinos_pamgen_extras;trilinos_pamgen;trilinos_amesos;trilinos_galeri;trilinos_aztecoo;trilinos_dpliris;trilinos_isorropia;trilinos_optipack;trilinos_thyratpetra;trilinos_thyraepetraext;trilinos_thyraepetra;trilinos_thyra;trilinos_epetraext;trilinos_tpetrainout;trilinos_tpetra;trilinos_triutils;trilinos_globipack;trilinos_shards;trilinos_zoltan;trilinos_epetra;trilinos_kokkoslinalg;trilinos_kokkosnodeapi;trilinos_kokkos;trilinos_rtop;trilinos_sacado;trilinos_tpi;trilinos_teuchos")
## The project tpl include paths
SET(Trilinos_TPL_INCLUDE_DIRS "")
## The project tpl library paths
SET(Trilinos_TPL_LIBRARY_DIRS "")
## The project tpl libraries
SET(Trilinos_TPL_LIBRARIES "/usr/lib/liblapack.so;/usr/lib/libblas.so")
## ---------------------------------------------------------------------------
## MPI specific variables
## These variables are provided to make it easier to get the mpi libraries
## and includes on systems that do not use the mpi wrappers for compiling
## ---------------------------------------------------------------------------
SET(Trilinos_MPI_LIBRARIES "")
SET(Trilinos_MPI_LIBRARY_DIRS "")
SET(Trilinos_MPI_INCLUDE_DIRS "")
SET(Trilinos_MPI_EXEC "MPI_EXEC-NOTFOUND")
SET(Trilinos_MPI_EXEC_MAX_NUMPROCS "")
SET(Trilinos_MPI_EXEC_NUMPROCS_FLAG "")
## ---------------------------------------------------------------------------
## Set useful general variables
## ---------------------------------------------------------------------------
## The packages enabled for this project
SET(Trilinos_PACKAGE_LIST "Mesquite;PyTrilinos;CTrilinos;MOOCHO;Rythmos;Moertel;NOX;Intrepid;Anasazi;FEI;Stratimikos;Tifpack;Belos;ML;Komplex;Ifpack;Pamgen;Amesos;Galeri;AztecOO;Pliris;Isorropia;OptiPack;Thyra;EpetraExt;Tpetra;Triutils;GlobiPack;Shards;Zoltan;Epetra;Kokkos;RTOp;Sacado;ThreadPool;Teuchos;TrilinosFramework")
## The TPLs enabled for this project
SET(Trilinos_TPL_LIST "LAPACK;BLAS;MPI")
FILE(GLOB PACKAGE_CONFIG_FILES "/usr/include/trilinos/*Config.cmake")
FOREACH(FILE ${PACKAGE_CONFIG_FILES})
IF(NOT ${FILE} MATCHES "TrilinosConfig.cmake")
INCLUDE(${FILE})
ENDIF()
ENDFOREACH()
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