Hi Luca,
I installed environment-modules and currently have the following lines in
my .bash_profile:
### dealii 9.2 ###
SPACK_ROOT=/Users/alexandergreiner/spack
export PATH=$SPACK_ROOT/bin:$PATH
MODULES_HOME=$(spack location -i environment-modules)
source ${MODULES_HOME}/init/zsh
. $SPACK_ROOT/share/spack/setup-env.sh
After spack load dealii, spack find --loaded shows (attached).
But, echo $DYLD_LIBRARY_PATH shows nothing. Do I have to pay attention to
something due to its clumsiness? Is there any further helpful
information/files that I can provide to you?
I highly appreciate the help I am receiving from all of you!
Regards
Alex
luca....@gmail.com schrieb am Montag, 28. September 2020 um 14:23:46 UTC+2:
> My suggestion is to install also environment-modules, and then use
>
> spack load dealii
>
> This will popolate DYLD_LIBRARY_PATH with the correct values and allows
> your cmake to find all libraries.
>
> Unfortunately, recent updates to spack have made its functionality a bit
> clumsy in Mac OS...
>
> L.
>
> > On 28 Sep 2020, at 13:40, 'Alexander Greiner' via deal.II User Group <
> dea...@googlegroups.com> wrote:
> >
> > Hi, thanks for your suggestions.
> >
> > Yes, Trilinos is installed by spack and
> > ls `spack location -i trilinos`/lib/libmuelu*
> > shows me the correct paths to the libmuelu libraries.
> > I also enabled Full Disk Access for Terminal.app and restarted the App
> as described.
> > Still, the libraries are not linked properly.
> >
> > Best
> > Alex
> >
> > Praveen C schrieb am Montag, 28. September 2020 um 13:08:14 UTC+2:
> > No, you dont have to recompile deal.II for what I am suggesting.
> >
> > I suppose that lib is installed by spack, have you checked
> >
> > ls `spack location -i trilinos`/lib/libmuelu*
> >
> > Not sure if this will help, but
> >
> > Have you enabled Full Disk Access for Terminal.app
> >
> > If not, can you enable it and try. See this
> >
> >
> https://macperformanceguide.com/blog/2020/20200208_2004macOS-Catalina-add-fullDiskAccess-Terminal.html
> >
> > best
> > praveen
> >
> >
> >> On 28-Sep-2020, at 3:53 PM, 'Alexander Greiner' via deal.II User Group <
> dea...@googlegroups.com> wrote:
> >>
> >> Hi Praveen,
> >>
> >> "Stupid" question beforehand: Do I have to reinstall deal.II? If yes,
> you can skip the remainder. If no, I did the following:
> >>
> >> I added that line to my ./bash_profile opened a new terminal window and
> executed
> >> source ./bash_profile
> >> spack load dealii
> >> cd spack/opt/.../deal.II/examples/step-1
> >> cmake . (I removed all previously generated "make"-files to obtain the
> initial directory content of step-1)
> >> make run
> >> Unfortunately, libmuelu is still not found. I attached a printout of my
> environment variables, if this might help...
> >
> >
> > --
> > The deal.II project is located at http://www.dealii.org/
> > For mailing list/forum options, see
> https://groups.google.com/d/forum/dealii?hl=en
> > ---
> > You received this message because you are subscribed to the Google
> Groups "deal.II User Group" group.
> > To unsubscribe from this group and stop receiving emails from it, send
> an email to dealii+un...@googlegroups.com.
> > To view this discussion on the web visit
> https://groups.google.com/d/msgid/dealii/97294b8d-4815-4f96-a346-8d8d6037ff35n%40googlegroups.com
> .
>
>
--
The deal.II project is located at http://www.dealii.org/
For mailing list/forum options, see
https://groups.google.com/d/forum/dealii?hl=en
---
You received this message because you are subscribed to the Google Groups
"deal.II User Group" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to dealii+unsubscr...@googlegroups.com.
To view this discussion on the web visit
https://groups.google.com/d/msgid/dealii/661b4cf3-dd9d-46ff-9d15-9cc6f074290en%40googlegroups.com.
{\rtf1\ansi\ansicpg1252\cocoartf2513
\cocoatextscaling0\cocoaplatform0{\fonttbl\f0\fnil\fcharset0 Menlo-Bold;\f1\fnil\fcharset0 Menlo-Regular;}
{\colortbl;\red255\green255\blue255;\red64\green11\blue217;\red0\green0\blue0;\red200\green20\blue201;
\red47\green180\blue29;\red46\green174\blue187;}
{\*\expandedcolortbl;;\cssrgb\c32308\c18668\c88227;\csgray\c0;\cssrgb\c83396\c23075\c82664;
\cssrgb\c20238\c73898\c14947;\cssrgb\c20196\c73240\c78250;}
\paperw11900\paperh16840\margl1440\margr1440\vieww26460\viewh8400\viewkind0
\pard\tx560\tx1120\tx1680\tx2240\tx2800\tx3360\tx3920\tx4480\tx5040\tx5600\tx6160\tx6720\pardirnatural\partightenfactor0
\f0\b\fs22 \cf2 \CocoaLigature0 ==>
\f1\b0 \cf3 40 installed packages\
-- \cf4 darwin-catalina-x86_64\cf3 / \cf5 apple-clang@12.0.0\cf3 ------------------\
adol-c\cf6 @2.7.2\cf3 bzip2\cf6 @1.0.8\cf3 gmsh\cf6 @4.5.4\cf3 hypre\cf6 @2.18.2\cf3 matio\cf6 @1.5.17\cf3 muparser\cf6 @2.2.6.1\cf3 netgen\cf6 @5.3.1\cf3 p4est\cf6 @2.2\cf3 suite-sparse\cf6 @5.7.2\cf3 tetgen\cf6 @1.5.0\cf3 \
arpack-ng\cf6 @develop\cf3 dealii\cf6 @9.2.0\cf3 gsl\cf6 @2.5\cf3 intel-tbb\cf6 @2020.3\cf3 metis\cf6 @5.1.0\cf3 nanoflann\cf6 @1.2.3\cf3 oce\cf6 @0.18.3\cf3 parmetis\cf6 @4.0.3\cf3 sundials\cf6 @3.2.1\cf3 trilinos\cf6 @13.0.0\cf3 \
assimp\cf6 @4.0.1\cf3 glm\cf6 @0.9.7.1\cf3 hdf5\cf6 @1.10.7\cf3 libiconv\cf6 @1.16\cf3 mpc\cf6 @1.1.0\cf3 netcdf-c\cf6 @4.7.4\cf3 openblas\cf6 @develop\cf3 petsc\cf6 @3.13.4\cf3 superlu-dist\cf6 @6.3.0\cf3 xz\cf6 @5.2.5\cf3 \
boost\cf6 @1.74.0\cf3 gmp\cf6 @6.1.2\cf3 hwloc\cf6 @1.11.11\cf3 libxml2\cf6 @2.9.10\cf3 mpfr\cf6 @4.0.2\cf3 netcdf-cxx\cf6 @4.2\cf3 openmpi\cf6 @3.1.6\cf3 slepc\cf6 @3.13.4\cf3 symengine\cf6 @0.6.0\cf3 zlib\cf6 @1.2.11\cf3 \
}
