Your message dated Fri, 20 Aug 2010 15:58:04 +0200
with message-id <[email protected]>
and subject line
has caused the Debian Bug report #593704,
regarding gdcm: FTBFS: *** glibc detected *** /usr/bin/doxygen: corrupted
double-linked list: 0x10554000 ***
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
593704: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=593704
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: gdcm
Version: 2.0.16-1
Severity: serious
> sbuild (Debian sbuild) 0.60.0 (23 Feb 2010) on poulenc.debian.org
>
> ╔══════════════════════════════════════════════════════════════════════════════╗
> ║ gdcm 2.0.16-1 (powerpc) 18 Aug 2010
> 14:52 ║
> ╚══════════════════════════════════════════════════════════════════════════════╝
[...]
> [ 96%] GDCM: Creating doxygen doc + tarball
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/MediaStorageAndFileFormat/gdcmPixmapReader.h:66:
> warning: Example StandardizeFiles.cs was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/MediaStorageAndFileFormat/gdcmPixmapWriter.h:64:
> warning: Example StandardizeFiles.cs was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:12:
> warning: Example GenFakeImage.cxx was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:35:
> warning: Example PatchFile.cxx was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:42:
> warning: Example SimplePrint.cs was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:45:
> warning: Example ReformatFile.cs was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:47:
> warning: Example ManipulateFile.cs was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:49:
> warning: Example StandardizeFiles.cs was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:51:
> warning: Example GenerateDICOMDIR.cs was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:52:
> warning: Example DecompressImage.cs was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:53:
> warning: Example DecompressJPEGFile.cs was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:55:
> warning: Example ScanDirectory.cs was already documented. Ignoring
> documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6/Utilities/doxygen/TestsList.txt:56:
> warning: Example ClinicalTrialIdentificationWorkflow.cs was already
> documented. Ignoring documentation found here.
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/Common/gdcmString.h:77:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/MediaStorageAndFileFormat/gdcmAnonymizer.h:93:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/DataStructureAndEncodingDefinition/gdcmDataElement.h:122:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/DataStructureAndEncodingDefinition/gdcmDataElement.h:123:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/MediaStorageAndFileFormat/gdcmFileDerivation.h:46:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/Common/gdcmString.h:77:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/Common/gdcmString.h:77:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/Common/gdcmTesting.h:40:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/MediaStorageAndFileFormat/gdcmUIDGenerator.h:53:
> warning: explicit link request to 'Generate()' could not be resolved
> This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian)
> restricted \write18 enabled.
> entering extended mode
> (./_formulas.tex
> LaTeX2e <2009/09/24>
> Babel <v3.8l> and hyphenation patterns for english, usenglishmax, dumylang,
> noh
> yphenation, loaded.
>
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/MediaStorageAndFileFormat/gdcmAnonymizer.h:93:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/DataStructureAndEncodingDefinition/gdcmDataElement.h:122:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/DataStructureAndEncodingDefinition/gdcmDataElement.h:123:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/MediaStorageAndFileFormat/gdcmFileDerivation.h:46:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/Common/gdcmString.h:77:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/Common/gdcmTesting.h:40:
> warning: Found unknown command `\0'
> /build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/Source/MediaStorageAndFileFormat/gdcmUIDGenerator.h:53:
> warning: explicit link request to 'Generate()' could not be resolved
> *** glibc detected *** /usr/bin/doxygen: corrupted double-linked list:
> 0x10554000 ***
> ======= Backtrace: =========
> /lib/libc.so.6(+0x82b84)[0xfc61b84]
> /lib/libc.so.6(+0x84794)[0xfc63794]
> /lib/libc.so.6(cfree+0x8c)[0xfc6720c]
> /usr/lib/libstdc++.so.6(_ZdlPv+0x2c)[0xff5d82c]
> /usr/lib/libstdc++.so.6(_ZdaPv+0x24)[0xff5d8a4]
> /usr/bin/doxygen[0x103323e8]
> /usr/bin/doxygen[0x1002cffc]
> /lib/libc.so.6(+0x3e9f4)[0xfc1d9f4]
> /lib/libc.so.6(+0x3ea3c)[0xfc1da3c]
> /lib/libc.so.6(+0x1f640)[0xfbfe640]
> /lib/libc.so.6(+0x1f800)[0xfbfe800]
> ======= Memory map: ========
> 00100000-00103000 r-xp 00100000 00:00 0
> [vdso]
> 0fbdf000-0fd48000 r-xp 00000000 fd:06 24612
> /lib/libc-2.11.2.so
> 0fd48000-0fd58000 ---p 00169000 fd:06 24612
> /lib/libc-2.11.2.so
> 0fd58000-0fd5c000 r--p 00169000 fd:06 24612
> /lib/libc-2.11.2.so
> 0fd5c000-0fd5d000 rw-p 0016d000 fd:06 24612
> /lib/libc-2.11.2.so
> 0fd5d000-0fd60000 rw-p 0fd5d000 00:00 0
> 0fd70000-0fd87000 r-xp 00000000 fd:06 24634
> /lib/libgcc_s.so.1
> 0fd87000-0fd96000 ---p 00017000 fd:06 24634
> /lib/libgcc_s.so.1
> 0fd96000-0fd97000 rw-p 00016000 fd:06 24634
> /lib/libgcc_s.so.1
> 0fda7000-0fe51000 r-xp 00000000 fd:06 24611
> /lib/libm-2.11.2.so
> 0fe51000-0fe61000 ---p 000aa000 fd:06 24611
> /lib/libm-2.11.2.so
> 0fe61000-0fe64000 r--p 000aa000 fd:06 24611
> /lib/libm-2.11.2.so
> 0fe64000-0fe65000 rw-p 000ad000 fd:06 24611
> /lib/libm-2.11.2.so
> 0fe75000-0ff99000 r-xp 00000000 fd:06 240046
> /usr/lib/libstdc++.so.6.0.13
> 0ff99000-0ffa8000 ---p 00124000 fd:06 240046
> /usr/lib/libstdc++.so.6.0.13
> 0ffa8000-0ffad000 r--p 00123000 fd:06 240046
> /usr/lib/libstdc++.so.6.0.13
> 0ffad000-0ffaf000 rw-p 00128000 fd:06 240046
> /usr/lib/libstdc++.so.6.0.13
> 0ffaf000-0ffb5000 rw-p 0ffaf000 00:00 0
> 0ffc5000-0ffdd000 r-xp 00000000 fd:06 24591
> /lib/libpthread-2.11.2.so
> 0ffdd000-0ffec000 ---p 00018000 fd:06 24591
> /lib/libpthread-2.11.2.so
> 0ffec000-0ffed000 r--p 00017000 fd:06 24591
> /lib/libpthread-2.11.2.so
> 0ffed000-0ffee000 rw-p 00018000 fd:06 24591
> /lib/libpthread-2.11.2.so
> 0ffee000-0fff0000 rw-p 0ffee000 00:00 0
> 10000000-104fb000 r-xp 00000000 fd:06 242103
> /usr/bin/doxygen
> 1050b000-10517000 rw-p 004fb000 fd:06 242103
> /usr/bin/doxygen
> 10517000-11513000 rwxp 10517000 00:00 0
> [heap]
> 40000000-40020000 r-xp 00000000 fd:06 24613
> /lib/ld-2.11.2.so
> 40020000-40021000 rw-p 40020000 00:00 0
> 40021000-40022000 r--p 00021000 fd:06 24613
> /lib/ld-2.11.2.so
> 40022000-40023000 rw-p 00022000 fd:06 24613
> /lib/ld-2.11.2.so
> 4002d000-40030000 rw-p 4002d000 00:00 0
> 40223000-40324000 rw-p 40223000 00:00 0
> 40365000-405e9000 rw-p 40365000 00:00 0
> 4062a000-408ae000 rw-p 4062a000 00:00 0
> 409af000-40ab0000 rw-p 409af000 00:00 0
> 40ab0000-40ab1000 ---p 40ab0000 00:00 0
> 40ab1000-40eb0000 rw-p 40ab1000 00:00 0
> 40eb0000-40eb1000 ---p 40eb0000 00:00 0
> 40eb1000-412b0000 rw-p 40eb1000 00:00 0
> 412b0000-412b1000 ---p 412b0000 00:00 0
> 412b1000-416b0000 rw-p 412b1000 00:00 0
> 41700000-41721000 rw-p 41700000 00:00 0
> 41721000-41800000 ---p 41721000 00:00 0
> fffea000-fffff000 rw-p ffffffeb000 00:00 0
> [stack]
> Aborted
> make[3]: *** [Utilities/doxygen/html/index.html] Error 134
> make[2]: *** [Utilities/doxygen/CMakeFiles/GDCMDoxygenDoc.dir/all] Error 2
> make[1]: *** [all] Error 2
> make: *** [debian/build-python2.6-stamp] Error 2
> dpkg-buildpackage: error: debian/rules build gave error exit status 2
> make[3]: Leaving directory
> `/build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6'
> make[2]: Leaving directory
> `/build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6'
> make[1]: Leaving directory
> `/build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k/gdcm-2.0.16/debian/build-python2.6'
> ────────────────────────────────────────────────────────────────────────────────
> Build finished at 20100818-1513
> FAILED [dpkg-buildpackage died]
> ────────────────────────────────────────────────────────────────────────────────
> Purging
> /var/lib/schroot/mount/sid-powerpc-sbuild-4ff07886-8817-472b-9b96-4d6330f4c744/build/buildd-gdcm_2.0.16-1-powerpc-jXjh6k
> Not removing build depends: cloned chroot in use
> ────────────────────────────────────────────────────────────────────────────────
> Finished at 20100818-1513
> Build needed 00:21:43, 198788k disc space
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Description: Digital signature
--- End Message ---
--- Begin Message ---
593704 is not a bug in gdcm. It is a bug in doxygen. See #591648 and #593317.
To fix the symptoms of the bug, I used the following trick:
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=591648#70
It did work nicely for most platform, except hppa.
Please continue on 591648 / doxygen package
Thanks.
--- End Message ---
