Your message dated Wed, 01 Aug 2012 13:47:11 +0000
with message-id <[email protected]>
and subject line Bug#683517: fixed in biomaj 1.2.0-7
has caused the Debian Bug report #683517,
regarding biomaj: Transition package to use default java runtime
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
683517: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=683517
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: biomaj
Version: 1.2.0-6
Severity: normal
Tags: patch
User: [email protected]
Usertags: origin-ubuntu quantal ubuntu-patch
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Dear Maintainer,
In Ubuntu, the attached patch was applied to achieve the following:
* Transition package to use default java implementation:
- d/rules: Specify source/target = 1.5 to ensure bytecode is backwards
compatible.
- d/control: BD on default-jdk only. Switch runtime dependency to
default-jre | java6-runtime.
These changes will ease transition when the default java implementation
changes (as it has done in Ubuntu quantal).
Thanks for considering the patch.
- -- System Information:
Debian Release: wheezy/sid
APT prefers quantal-updates
APT policy: (500, 'quantal-updates'), (500, 'quantal-security'), (500,
'quantal')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 3.5.0-7-generic (SMP w/8 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
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diff -Nru biomaj-1.2.0/debian/changelog biomaj-1.2.0/debian/changelog
diff -Nru biomaj-1.2.0/debian/control biomaj-1.2.0/debian/control
--- biomaj-1.2.0/debian/control 2012-06-22 08:54:37.000000000 +0100
+++ biomaj-1.2.0/debian/control 2012-08-01 13:08:22.000000000 +0100
@@ -8,7 +8,7 @@
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/biomaj/trunk/
Homepage: http://biomaj.genouest.org
Build-Depends: debhelper (>= 7.1)
-Build-Depends-Indep: debconf, po-debconf, openjdk-6-jdk|default-jdk|sun-java6-jdk, ant, libhsqldb-java, ant-contrib,
+Build-Depends-Indep: debconf, po-debconf, default-jdk, ant, libhsqldb-java, ant-contrib,
liblog4j1.2-java, libcommons-net2-java, libcommons-dbcp-java, libgnumail-java, libcommons-pool-java,
libgnujaf-java, libjgoodies-forms-java, liboro-java, libregexp-java,
libjcommon-java, libjsch-java, libjdom1-java, junit4, libsaxonb-java, libjdepend-java,
@@ -19,7 +19,7 @@
Package: biomaj
Architecture: all
Depends: ${misc:Depends}, ${java:Depends},
- openjdk-6-jdk|default-jdk|sun-java6-jdk, ant, libmysql-java, debconf,
+ default-jre | java6-runtime, ant, libmysql-java, debconf,
libhsqldb-java,ant-contrib,liblog4j1.2-java,libcommons-net2-java (>= 2.2),libcommons-dbcp-java (>= 1.2),
libgnumail-java, libcommons-pool-java (>= 1.5), libgnujaf-java, libjgoodies-forms-java (>= 1.2),
liboro-java (>= 2.0),libregexp-java (>= 1.4),libjcommon-java (>= 1.0),libjsch-java (>= 0.1.42),
diff -Nru biomaj-1.2.0/debian/rules biomaj-1.2.0/debian/rules
--- biomaj-1.2.0/debian/rules 2012-03-02 15:23:10.000000000 +0000
+++ biomaj-1.2.0/debian/rules 2012-08-01 13:03:00.000000000 +0100
@@ -16,8 +16,8 @@
dh $@ --with javahelper
override_dh_auto_build:
- ant -f usr/share/biomaj/build.xml
- javac -d usr/share/biomaj/bin usr/share/biomaj/bin/Configurator.java
+ ant -Dant.build.javac.source=1.5 -Dant.build.javac.target=1.5 -f usr/share/biomaj/build.xml
+ javac -source 1.5 -target 1.5 -d usr/share/biomaj/bin usr/share/biomaj/bin/Configurator.java
override_dh_clean:
dh_clean
--- End Message ---
--- Begin Message ---
Source: biomaj
Source-Version: 1.2.0-7
We believe that the bug you reported is fixed in the latest version of
biomaj, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Olivier Sallou <[email protected]> (supplier of updated biomaj package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 01 Aug 2012 14:58:41 +0200
Source: biomaj
Binary: biomaj biomaj-properties
Architecture: source all
Version: 1.2.0-7
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Olivier Sallou <[email protected]>
Description:
biomaj - biological data-bank updater
biomaj-properties - biological data-bank updater - example properties files
Closes: 683517
Changes:
biomaj (1.2.0-7) unstable; urgency=low
.
[ Olivier Sallou ]
Patch from James Page <[email protected]> (Closes: #683517)
* Transition package to use default java implementation:
- d/rules: Specify source/target = 1.5 to ensure bytecode is backwards
compatible.
- d/control: BD on default-jdk only. Switch runtime dependency to
default-jre | java6-runtime.
Checksums-Sha1:
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9a732115acd7bf796b59efdfc83e7902831fe7b2 12450060 biomaj_1.2.0-7_all.deb
0d003ec126d3f223cde9e575af6c758ee6659e20 34710
biomaj-properties_1.2.0-7_all.deb
Checksums-Sha256:
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biomaj_1.2.0-7.dsc
07abd3ce3e5e5243b1d7e8123d12f45c1d3e5dccca1fd4ea0f982b8eedfb9e69 24157
biomaj_1.2.0-7.debian.tar.gz
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biomaj_1.2.0-7_all.deb
96d3373dd9f624bea507bb6e4c3c504c53872e60fe60476ca98bdf58e1e50f1c 34710
biomaj-properties_1.2.0-7_all.deb
Files:
49f111575936d33b446a4499cc4257b5 2490 science optional biomaj_1.2.0-7.dsc
d2f1a2449267353a765b081f92647412 24157 science optional
biomaj_1.2.0-7.debian.tar.gz
ade36248f171186b6961b27e492af1c4 12450060 science optional
biomaj_1.2.0-7_all.deb
4697967d8dd5ea66879cf088dbedadb6 34710 science optional
biomaj-properties_1.2.0-7_all.deb
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