Your message dated Thu, 19 Dec 2019 16:34:16 +0000
with message-id <[email protected]>
and subject line Bug#925499: fixed in bowtie2 2.3.5.1-6
has caused the Debian Bug report #925499,
regarding bowtie2 arm64 (aarch64) package
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
925499: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=925499
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: bowtie2
Severity: wishlist
Dear bowtie2 maintainer,
As the latest version bowtie2 2.3.5 started to support arm64 (aarch64) as a
experiment.
Is it possible for you to prepare bowtie2 arm64 (aarch64) deb pacakge?
Here is my contribution to support it on the bowtie2 upstream project.
https://github.com/BenLangmead/bowtie2/pull/216
You can refer how to build it by seeing Makefile.
We need a patch to the source code.
See 4 sed commands in the bottom part of Dockerfile-aarch64.
Thank you.
-- System Information:
Debian Release: 9.8
APT prefers stable-updates
APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: amd64 (x86_64)
Kernel: Linux 4.9.0-8-amd64 (SMP w/1 CPU core)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8),
LANGUAGE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
--- End Message ---
--- Begin Message ---
Source: bowtie2
Source-Version: 2.3.5.1-6
We believe that the bug you reported is fixed in the latest version of
bowtie2, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael R. Crusoe <[email protected]> (supplier of updated bowtie2
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 18 Dec 2019 13:36:56 +0100
Source: bowtie2
Architecture: source
Version: 2.3.5.1-6
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Michael R. Crusoe <[email protected]>
Closes: 925499
Changes:
bowtie2 (2.3.5.1-6) unstable; urgency=medium
.
* Team upload.
* Remove the -m64 flag; not needed and not as universal as I thought
* This means we build on arm64. (Closes: #925499)
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