Your message dated Tue, 16 Jan 2024 11:34:05 +0000
with message-id <[email protected]>
and subject line Bug#1056815: fixed in mdtraj 1.9.9-1
has caused the Debian Bug report #1056815,
regarding mdtraj: ftbfs with cython 3.0.x
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1056815: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1056815
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:mdtraj
Version: 1.9.7-6
Severity: important
Tags: sid trixie
User: [email protected]
Usertags: cython3
[This bug is targeted to the upcoming trixie release]
The package fails to build in a test rebuild on at least arm64 with
cython 3.0.5, but succeeds to build with cython 0.29.36. Please
update the package to build with cython 3.0.5 (available in experimental).
If the package cannot be built with cython 3.0.5, please change the
build dependency from cython3 to cython3-legacy (available now in
unstable). There is no replacement for cython3-dbg.
Build logs building with cython 3.0.5 can be found at
https://people.debian.org/~stefanor/cython3/cython-3.0.5/
See also https://lists.debian.org/debian-python/2023/11/msg00034.html
--- End Message ---
--- Begin Message ---
Source: mdtraj
Source-Version: 1.9.9-1
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
mdtraj, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated mdtraj package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 16 Jan 2024 11:14:21 +0100
Source: mdtraj
Architecture: source
Version: 1.9.9-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1045994 1056815
Changes:
mdtraj (1.9.9-1) unstable; urgency=medium
.
* Team upload.
* Switch to cython3-legacy.
Closes: #1056815
* Fix clean target
Closes: #1045994
* Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Use secure URI in Homepage field.
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse.
* Fix field name typo in debian/copyright (Comments ⇒ Comment).
* Explicitly call dh_python3 in d/rules
* d/rules: verbose
* Fix capitalisation in description
* Set hardening options
* Manually remove copy of libtheobald.a in /usr/lib/python3.1*/dist-packages
* Update python_hashbang.patch to replace all instances of /bin/env
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