Your message dated Sun, 14 Jul 2024 16:34:41 +0000
with message-id <[email protected]>
and subject line Bug#1075190: fixed in libmuscle 3.7+4565-8
has caused the Debian Bug report #1075190,
regarding libmuscle: ftbfs with GCC-14
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1075190: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1075190
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:libmuscle
Version: 3.7+4565-7
Severity: important
Tags: sid trixie
User: [email protected]
Usertags: ftbfs-gcc-14
[This bug is targeted to the upcoming trixie release]
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-14/g++-14, but succeeds to build with gcc-13/g++-13. The
severity of this report will be raised before the trixie release.
The full build log can be found at:
http://qa-logs.debian.net/2024/07/01/libmuscle_3.7+4565-7_unstable_gccexp.log
The last lines of the build log are at the end of this report.
To build with GCC 14, either set CC=gcc-14 CXX=g++-14 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-14/porting_to.html
[...]
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
d-shlibmove --commit \
--multiarch \
--devunversioned \
--exclude-la \
--movedev debian/tmp/usr/include/* usr/include \
--movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc"
usr/lib/x86_64-linux-gnu/pkgconfig \
debian/tmp/usr/lib/*/*.so
Library package automatic movement utility
set -e
install -d -m 755 debian/libmuscle-dev/usr/lib/x86_64-linux-gnu
install -d -m 755 debian/libmuscle1/usr/lib/x86_64-linux-gnu
mv debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.a
debian/libmuscle-dev/usr/lib/x86_64-linux-gnu
mv debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.so
debian/libmuscle-dev/usr/lib/x86_64-linux-gnu
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.so.1
debian/libmuscle1/usr/lib/x86_64-linux-gnu
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.so.1.0.0
debian/libmuscle1/usr/lib/x86_64-linux-gnu
PKGDEV=libmuscle-dev
PKGSHL=libmuscle1
install -d -m 755 debian/libmuscle-dev/usr/include
mv debian/tmp/usr/include/libMUSCLE debian/libmuscle-dev/usr/include
install -d -m 755 debian/libmuscle-dev/usr/lib/x86_64-linux-gnu/pkgconfig
mv debian/tmp/usr/lib/*/pkgconfig/*.pc
debian/libmuscle-dev/usr/lib/x86_64-linux-gnu/pkgconfig
dh_link -plibmuscle1 usr/lib/x86_64-linux-gnu/libMUSCLE.so.1
usr/lib/x86_64-linux-gnu/libMUSCLE-3.7.so.1
find debian -name "lib*.la" -delete
# The binary is taken rather from the package muscle
rm -rf debian/tmp/usr/bin/muscle
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs
dh_installchangelogs
dh_lintian
dh_perl
dh_link
dh_strip_nondeterminism
dh_compress
dh_fixperms
dh_missing
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dpkg-gensymbols: warning: some new symbols appeared in the symbols file: see
diff output below
dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols
file: see diff output below
dpkg-gensymbols: warning: debian/libmuscle1/DEBIAN/symbols doesn't match
completely debian/libmuscle1.symbols
--- debian/libmuscle1.symbols (libmuscle1_3.7+4565-7_amd64)
+++ dpkg-gensymbols_lC04_ 2024-07-02 01:15:38.142997696 +0000
@@ -838,11 +838,16 @@
_ZNK6muscle8EdgeList5LogMeEv@Base 3.7+4565
_ZNK6muscle8EdgeList7GetEdgeEjPjS1_@Base 3.7+4565
_ZNK6muscle8EdgeList8GetCountEv@Base 3.7+4565
-
_ZNSt6vectorIPN6muscle3SeqESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base
3.7+4565
-
(optional)_ZNSt6vectorIcSaIcEE17_M_realloc_insertIJRKcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base
3.7+4565
-
(optional)_ZNSt6vectorIcSaIcEE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPcS1_EE@Base
3.7+4565
+ _ZNSt12_Vector_baseIcSaIcEED1Ev@Base 3.7+4565-7
+ _ZNSt12_Vector_baseIcSaIcEED2Ev@Base 3.7+4565-7
+ _ZNSt6vectorIPN6muscle3SeqESaIS2_EE17_M_realloc_appendIJRKS2_EEEvDpOT_@Base
3.7+4565-7
+#MISSING: 3.7+4565-7#
_ZNSt6vectorIPN6muscle3SeqESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base
3.7+4565
+ _ZNSt6vectorIcSaIcEE17_M_realloc_appendIJRKcEEEvDpOT_@Base 3.7+4565-7
+#MISSING: 3.7+4565-7#
(optional)_ZNSt6vectorIcSaIcEE17_M_realloc_insertIJRKcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base
3.7+4565
+ _ZNSt6vectorIcSaIcEE7reserveEm@Base 3.7+4565-7
+#MISSING: 3.7+4565-7#
(optional)_ZNSt6vectorIcSaIcEE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPcS1_EE@Base
3.7+4565
(arch-bits=32)_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base
3.7+4565
-
(arch-bits=64)_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base
3.7+4565
+#MISSING: 3.7+4565-7#
(arch-bits=64)_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base
3.7+4565
_ZTIN6muscle10ClustSetDFE@Base 3.7+4565
_ZTIN6muscle10DistCalcDFE@Base 3.7+4565
_ZTIN6muscle11ClustSetMSAE@Base 3.7+4565
dh_makeshlibs: error: failing due to earlier errors
make: *** [debian/rules:6: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--- End Message ---
--- Begin Message ---
Source: libmuscle
Source-Version: 3.7+4565-8
Done: Étienne Mollier <[email protected]>
We believe that the bug you reported is fixed in the latest version of
libmuscle, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Étienne Mollier <[email protected]> (supplier of updated libmuscle package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 14 Jul 2024 18:06:32 +0200
Source: libmuscle
Architecture: source
Version: 3.7+4565-8
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Étienne Mollier <[email protected]>
Closes: 1015504 1075190
Changes:
libmuscle (3.7+4565-8) unstable; urgency=medium
.
[ Steffen Möller ]
* Add new file with ref to conda
.
[ Balint Reczey ]
* debian/libmuscle1.symbols: Mark symbols which were optimized away on
s390x as optional (Closes: #1075190)
.
[ Étienne Mollier ]
* d/libmuscle1.symbols: mark symbols trimmed by LTO builds as optional.
(Closes: #1015504)
* d/rules: force LTO builds.
This is done after ensuring all reverse dependencies are still
operating properly; there were a couple of dubious Muscle symbols
trimmed by LTO builds, but C++ inflation of intricate symbols makes it
hard to make sense whether symbols drop is harmful or not.
* d/control: declare compliance to standards version 4.7.0.
* d/control: add myself to uploaders.
* d/control: migrate from pkg-config to pkgconf.
* d/libmuscle1.lintian-overrides: delete: unused override.
* d/libmuscle1.symbols: append missing Build-Depends-Package field.
* d/libmuscle1.symbols: also flag a symbole formerly 32-bit only.
Checksums-Sha1:
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671498af13737e54b8ba2bf68df0132e48ac1dc3 12720
libmuscle_3.7+4565-8.debian.tar.xz
Checksums-Sha256:
1a897ee42437a4948b4eed8515c626af60f2dc570c8a1c157077b4f34d6b267f 2237
libmuscle_3.7+4565-8.dsc
c8796dbb9a90a43735c069ac9a52ed81032c73df957b03e43f00f109a013359e 12720
libmuscle_3.7+4565-8.debian.tar.xz
Files:
30295ca4106e2bb3d188b5c10da59f51 2237 science optional libmuscle_3.7+4565-8.dsc
fd3c943a2dcbbadc6f09a31a55e708f7 12720 science optional
libmuscle_3.7+4565-8.debian.tar.xz
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