Hi, Andreas, على الخميس 27 تشرين الأول 2016 23:39، كتب Andreas Tille: > On Sun, 26 Jun 2016 16:10:02 -0700, Afif Elghraoui wrote: >> For the record here, building with -msse2 doesn't help on i386 (build >> log attached). According to upstream discussion, the problem has to do >> with NaNs. > > So what can we actually do with this. Bcftools has several reverse > (Build-)Dependencies and we need to decide whether we drop the failed > architectures for all these. >
Upstream's planned solution to this requires some changes to their format specification (details are in the upstream bug report). I think we just have to wait. > Alternatively we could consider to document that some tests are failing > on certain architectures and let those failed tests pass. > I don't know if this is a good idea. The tests fail because inaccurate results, not crashes. If we let these through, users on these architectures would unsuspectingly get wrong output. If we /really/ want to, we could make a different package for pysam's bcftools interface. Reverse-dependencies that only need the samtools interface could then be untethered from this bug. I wouldn't volunteer to do this, though. regards Afif -- Afif Elghraoui | عفيف الغراوي http://afif.ghraoui.name