El 23 de maig de 2011 20:00, Adrià Cereto Massagué <ssorga...@gmail.com> ha escrit: > It turns out that I ws missing some stuff in CLASSPATH. After adding > xom and jaxen libraries I get a different error, though: > > ssorgatem:/tmp$ python > Python 2.6.6 (r266:84292, Apr 20 2011, 09:34:38) > [GCC 4.5.2] on linux2 > Type "help", "copyright", "credits" or "license" for more information. >>>> from glob import glob >>>> import os >>>> os.environ['CLASSPATH'] = ":".join(glob("/usr/share/java/cdk*.jar")) + ":" >>>> + ":".join(glob("/usr/share/java/xom*.jar"))+ ":" + >>>> ":".join(glob("/usr/share/java/jaxen*.jar")) >>>> from cinfony import cdk > /usr/lib/pymodules/python2.6/jpype/_pykeywords.py:18: > DeprecationWarning: the sets module is deprecated > import sets > Traceback (most recent call last): > File "<stdin>", line 1, in <module> > File "/usr/local/lib/python2.6/dist-packages/cinfony/cdk.py", line > 13, in <module> > from cdkjpype import * > File "/usr/local/lib/python2.6/dist-packages/cinfony/cdkjpype.py", > line 74, in <module> > forcefields = > list(cdk.modeling.builder3d.ModelBuilder3D.getInstance().getFfTypes()) > File "/usr/lib/pymodules/python2.6/jpype/_jpackage.py", line 53, in __call__ > raise TypeError, "Package "+self.__name+" is not Callable" > TypeError: Package > org.openscience.cdk.modeling.builder3d.ModelBuilder3D.getInstance is > not Callable >>>> > > -- > Adrià Cereto Massagué > Biotechnology student > Universitat Rovira i Virgili > > Languages: Català, Español, English, Français, Deutsch, Português, Esperanto > > Nota importante | Important Notice >
After some investigation here http://code.google.com/p/cinfony/issues/detail?id=7 It seems to be a problem with non-declared package dependencies, on apt it only states it depends on default-jre-headles or java5-runtime-headless, but it seems to rquire quite a bunch of other java libraries. So the title of the bug report should be changed to something like 'non-declared dependencies' -- Adrià Cereto Massagué Biotechnology student Universitat Rovira i Virgili Languages: Català, Español, English, Français, Deutsch, Português, Esperanto Nota importante | Important Notice -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org