Package: wnpp Severity: wishlist Package name: abyss Version: 1.2.7 Upstream Author: [email protected] URL: http://www.bcgsc.ca/platform/bioinfo/software/abyss License: free for academic use Description: a de novo, parallel, paired-end sequence assembler ABySS is a de novo, parallel, paired-end sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread. . To cite your use of ABySS, please reference ABySS: A parallel assembler for short read sequence data. Simpson JT, Wong K, Jackman SD, Schein JE, Jones SJ, Birol I. Genome Research, 2009-June.
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