Your message dated Tue, 01 Dec 2020 15:51:18 +0000 with message-id <e1kk7vy-000ekh...@fasolo.debian.org> and subject line Bug#975858: fixed in pplacer 1.1~alpha19-4 has caused the Debian Bug report #975858, regarding pplacer: FTBFS: Error: Unbound module Gsl_error to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 975858: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=975858 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: pplacer Version: 1.1~alpha19-3 Severity: serious Justification: FTBFS on amd64 Tags: bullseye sid ftbfs Usertags: ftbfs-20201125 ftbfs-bullseye Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[3]: Entering directory '/<<PKGBUILDDIR>>' > ocamlbuild pplacer.native > /usr/bin/ocamlopt.opt unix.cmxa -I /usr/lib/ocaml/ocamlbuild > /usr/lib/ocaml/ocamlbuild/ocamlbuildlib.cmxa myocamlbuild.ml > /usr/lib/ocaml/ocamlbuild/ocamlbuild.cmx -o myocamlbuild > /bin/sh: 1: git: not found > File "_tags", line 8, characters 154-161: > Warning: the tag "pkg_str" is not used in any flag or dependency declaration, > so it will have no effect; it may be a typo. Otherwise you can use > `mark_tag_used` in your myocamlbuild.ml to disable this warning. > File "_tags", line 8, characters 112-124: > Warning: the tag "pkg_bigarray" is not used in any flag or dependency > declaration, so it will have no effect; it may be a typo. Otherwise you can > use `mark_tag_used` in your myocamlbuild.ml to disable this warning. > File "_tags", line 8, characters 102-110: > Warning: the tag "pkg_unix" is not used in any flag or dependency > declaration, so it will have no effect; it may be a typo. Otherwise you can > use `mark_tag_used` in your myocamlbuild.ml to disable this warning. > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c cdd_src/cddcore.c > mv cddcore.o cdd_src/cddcore.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c cdd_src/cddio.c > mv cddio.o cdd_src/cddio.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c cdd_src/cddlib.c > + ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c cdd_src/cddlib.c > cdd_src/cddlib.c: In function ‘dd_DDMain’: > cdd_src/cddlib.c:116:7: warning: this ‘for’ clause does not guard... > [-Wmisleading-indentation] > 116 | for (itemp=1; cone->OrderVector[itemp]!=hh; itemp++); > | ^~~ > cdd_src/cddlib.c:117:9: note: ...this statement, but the latter is > misleadingly indented as if it were guarded by the ‘for’ > 117 | otemp=cone->OrderVector[cone->Iteration]; > | ^~~~~ > mv cddlib.o cdd_src/cddlib.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c cdd_src/cddlp.c > mv cddlp.o cdd_src/cddlp.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c cdd_src/cddmp.c > mv cddmp.o cdd_src/cddmp.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c cdd_src/cddproj.c > mv cddproj.o cdd_src/cddproj.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c cdd_src/setoper.c > mv setoper.o cdd_src/setoper.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c cdd_src/pplacer_cdd.c > mv pplacer_cdd.o cdd_src/pplacer_cdd.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c cdd_src/caml_cdd.c > mv caml_cdd.o cdd_src/caml_cdd.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c pam_src/pam.c > mv pam.o pam_src/pam.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c pam_src/caml_pam.c > + ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c pam_src/caml_pam.c > In file included from /usr/lib/ocaml/caml/bigarray.h:23, > from pam_src/caml_pam.c:2: > pam_src/caml_pam.c: In function ‘caml_pam’: > /usr/lib/ocaml/caml/mlvalues.h:265:23: warning: initialization discards > ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] > 265 | #define String_val(x) ((const char *) Bp_val(x)) > | ^ > pam_src/caml_pam.c:18:16: note: in expansion of macro ‘String_val’ > 18 | char *keep = String_val(keep_value); > | ^~~~~~~~~~ > mv caml_pam.o pam_src/caml_pam.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c pplacer_src/linear_c.c > mv linear_c.o pplacer_src/linear_c.o > ocamlfind ocamlc -ccopt -Wall -ccopt -funroll-loops -ccopt -O3 -ccopt -fPIC > -c pplacer_src/unix_support.c > mv unix_support.o pplacer_src/unix_support.o > /usr/bin/ocamlmklib.opt -o cdd_src/cdd cdd_src/cddcore.o cdd_src/cddio.o > cdd_src/cddlib.o cdd_src/cddlp.o cdd_src/cddmp.o cdd_src/cddproj.o > cdd_src/setoper.o cdd_src/pplacer_cdd.o cdd_src/caml_cdd.o > /usr/bin/ocamlmklib.opt -o pam_src/pplacer_pam pam_src/pam.o > pam_src/caml_pam.o > /usr/bin/ocamlmklib.opt -o pplacer_src/pplacercside pplacer_src/linear_c.o > pplacer_src/unix_support.o > ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl > -package sqlite3 -package zip -package mcl -modules pplacer_src/pplacer.ml > > pplacer_src/pplacer.ml.depends > ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl > -package sqlite3 -package zip -package mcl -modules pplacer_src/check.ml > > pplacer_src/check.ml.depends > ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl > -package sqlite3 -package zip -package mcl -modules common_src/ppatteries.ml > > common_src/ppatteries.ml.depends > ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl > -package sqlite3 -package zip -package mcl -modules common_src/algMap.ml > > common_src/algMap.ml.depends > ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl > -package sqlite3 -package zip -package mcl -modules common_src/mapsSets.ml > > common_src/mapsSets.ml.depends > ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl > -package sqlite3 -package zip -package mcl -modules common_src/ppr.ml > > common_src/ppr.ml.depends > ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm > -package gsl -package sqlite3 -package zip -package mcl -thread -I common_src > -I pplacer_src -I pam_src -I cdd_src -I tests -I json_src -I pdprune_src -I > tests/rppr -I tests/guppy -I tests/json -I tests/pplacer -o > common_src/ppr.cmo common_src/ppr.ml > ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl > -package sqlite3 -package zip -package mcl -modules common_src/number.ml > > common_src/number.ml.depends > ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm > -package gsl -package sqlite3 -package zip -package mcl -thread -I common_src > -I pplacer_src -I pam_src -I cdd_src -I tests -I json_src -I pdprune_src -I > tests/rppr -I tests/guppy -I tests/json -I tests/pplacer -o > common_src/mapsSets.cmo common_src/mapsSets.ml > ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm > -package gsl -package sqlite3 -package zip -package mcl -thread -I common_src > -I pplacer_src -I pam_src -I cdd_src -I tests -I json_src -I pdprune_src -I > tests/rppr -I tests/guppy -I tests/json -I tests/pplacer -o > common_src/number.cmo common_src/number.ml > ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm > -package gsl -package sqlite3 -package zip -package mcl -thread -I common_src > -I pplacer_src -I pam_src -I cdd_src -I tests -I json_src -I pdprune_src -I > tests/rppr -I tests/guppy -I tests/json -I tests/pplacer -o > common_src/algMap.cmo common_src/algMap.ml > ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm > -package gsl -package sqlite3 -package zip -package mcl -thread -I common_src > -I pplacer_src -I pam_src -I cdd_src -I tests -I json_src -I pdprune_src -I > tests/rppr -I tests/guppy -I tests/json -I tests/pplacer -o > common_src/ppatteries.cmo common_src/ppatteries.ml > + ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package > xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I > common_src -I pplacer_src -I pam_src -I cdd_src -I tests -I json_src -I > pdprune_src -I tests/rppr -I tests/guppy -I tests/json -I tests/pplacer -o > common_src/ppatteries.cmo common_src/ppatteries.ml > File "common_src/ppatteries.ml", line 784, characters 2-16: > 784 | Gsl_error.init (); > ^^^^^^^^^^^^^^ > Error: Unbound module Gsl_error > Command exited with code 2. > make[3]: *** [Makefile:21: pplacer.native] Error 10 The full build log is available from: http://qa-logs.debian.net/2020/11/25/pplacer_1.1~alpha19-3_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures.
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--- Begin Message ---Source: pplacer Source-Version: 1.1~alpha19-4 Done: Nilesh Patra <npatra...@gmail.com> We believe that the bug you reported is fixed in the latest version of pplacer, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 975...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Nilesh Patra <npatra...@gmail.com> (supplier of updated pplacer package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Tue, 01 Dec 2020 19:54:07 +0530 Source: pplacer Architecture: source Version: 1.1~alpha19-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Nilesh Patra <npatra...@gmail.com> Closes: 975858 Changes: pplacer (1.1~alpha19-4) unstable; urgency=medium . * Team Upload. * Pull and modify upstream PR to fix FTBFS w/ new version of libocamlgsl-ocaml-dev (Closes: #975858) * Standards version: 4.5.1 Checksums-Sha1: b9600c678fa0d0df5d68eac34603d97ac0f61329 2210 pplacer_1.1~alpha19-4.dsc 20d4c7f7eba9a386068ea354c5dac57bee4b7e6b 28220 pplacer_1.1~alpha19-4.debian.tar.xz 07cbc4d687c810ac5ecc1fe14ea2f8a61fc5fc71 7109 pplacer_1.1~alpha19-4_amd64.buildinfo Checksums-Sha256: 0b147a27e12b91de8268347ce020a4f31a3024162e6bede336c60bbb5afde343 2210 pplacer_1.1~alpha19-4.dsc 1ce11657a5736360332e103572a36fe3a43b5fdab51c1a7925006841df783388 28220 pplacer_1.1~alpha19-4.debian.tar.xz af44fea5374b07f7b16be99081c3a4c7163f3ad6b30ada1e186d101070d60b5e 7109 pplacer_1.1~alpha19-4_amd64.buildinfo Files: c5c6f9baf4afb5269618724f7cce140d 2210 science optional pplacer_1.1~alpha19-4.dsc dafe44d2a01d6049df20774102323550 28220 science optional pplacer_1.1~alpha19-4.debian.tar.xz 3fa62ac4145e984841d9f2b364d728cb 7109 science optional pplacer_1.1~alpha19-4_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAl/GYEQUHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafE1Og/8Dk+nzEtYu3pcbAM8iTkrcvAqA6Ez yum7sB9Z9uCIUM1TYq3iVOtzR72jVTtHF1f/bSVu75gHHoJtRIoRyhOeQYC3nt2u fUKgN88jMg8J4X9V8GIkEQqYprbqzZpK0UH1H0sRr7EqjGuyVwirCFmy6NbWw5s7 TR4foItnK/GqZdUzrDwLiUKGP39QXdOVyfetWRUFSw8Hd+k5QVejcjvC/646VM6y G1ORQXKYbs3XBPj5P7ny+tIEXISLzhs0bu54DkDR+xtCcl0oY5Nz2T3JbL5q+ncf K+9qNR6hqJAAUlyzi2VsKE0M1+sP7BH2QH0q/UJ/pJUPzoIcgxvY+JPGPLLnRbvG pLiCFQd0d4Q7u8INFAaDx3cAUJSF2nVmr6ByTBNCrbtxnKLRgGHkgqsms8I2UdSq BhB//6bhafdIJe1njo/yg3DfJVI7xUQFW7pfkF868m2bMc4/w8Fryv9g+kdQVo2c jpnLfKYKye59DEOO5n1XEpiaBUEGaznSrkE4RFuCE0yPn87dDe/h36CPZZan9FxS iDeeNhLHl/Yi385Ba7GZJi8BSwC2pGOhmU3Vvkuue3STancZpAPrFXAWKA+1h4UY 4GhEgaFeu5xHuNmCOL3SZiPYjlaWAQVrVF33Tr5/sfSIBPgsK6GT9tT+Kd7EXOPy xQRiXd1BMAc516o= =6HT1 -----END PGP SIGNATURE-----
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