Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits: 46a1473d by Andreas Tille at 2022-02-02T13:42:19+00:00 automatic update - - - - - 2 changed files: - debian-med-tests.txt - outdated_med-packages.txt Changes: ===================================== debian-med-tests.txt ===================================== @@ -1,57 +1,55 @@ -Last-Update: Wed, 02 Feb 2022 01:42:03 +0000 +Last-Update: Wed, 02 Feb 2022 13:42:03 +0000 Source | Vote | Tasks | Tags -------------------------------+--------+-----------------------------------------------------+---------------------------------------------------------------------- - dcmtk | 188 | {covid-19,imaging} | - orthanc | 101 | {imaging,covid-19,practice} | + dcmtk | 189 | {covid-19,imaging} | + orthanc | 102 | {imaging,covid-19,practice} | orthanc-wsi | 55 | {practice,laboratory,covid-19,imaging,his,oncology} | - htsjdk | 36 | {bio-dev} | - dicomscope | 27 | {imaging} | - amide | 26 | {imaging} | + htsjdk | 34 | {bio-dev} | + amide | 27 | {imaging} | dcm2niix | 26 | {imaging} | + dicomscope | 26 | {imaging} | dicom3tools | 25 | {imaging} | orthanc-webviewer | 18 | {imaging} | - ngs-sdk | 17 | {bio-dev} | + ngs-sdk | 16 | {bio-dev} | gnumed-server | 15 | {practice,covid-19} | - gdcm | 14 | {covid-19,imaging} | - invesalius | 13 | {imaging} | - adun.app | 11 | {bio} | - gdcm | 11 | {imaging-dev} | + gdcm | 12 | {covid-19,imaging} | + invesalius | 12 | {imaging} | lagan | 11 | {bio} | + minc-tools | 11 | {imaging} | mrtrix3 | 11 | {imaging} | - minc-tools | 10 | {imaging} | + adun.app | 10 | {bio} | + gdcm | 10 | {imaging-dev} | + dicomnifti | 9 | {imaging} | nifticlib | 9 | {imaging-dev} | + nifticlib | 9 | {imaging} | openslide | 9 | {imaging-dev} | orthanc-dicomweb | 9 | {imaging,covid-19} | - dicomnifti | 8 | {imaging} | libminc | 8 | {imaging-dev} | - librg-utils-perl | 8 | {bio} | - mia | 8 | {imaging} | ngs-sdk | 8 | {bio-dev} | - nifticlib | 8 | {imaging} | - openslide | 8 | {imaging} | orthanc-postgresql | 8 | {imaging} | pixelmed | 8 | {imaging} | - biojava-live | 7 | {bio-dev} | - libncl | 7 | {bio} | + mia | 7 | {imaging} | ngs-sdk | 7 | {bio-dev} | nifti2dicom | 7 | {imaging} | + openslide | 7 | {imaging} | plastimatch | 7 | {imaging} | + biojava-live | 6 | {bio-dev} | + libncl | 6 | {bio} | nifti2dicom | 6 | {imaging} | + orthanc-mysql | 6 | {imaging} | salmon | 6 | {bio,covid-19} | treeview | 6 | {bio-phylogeny,bio} | bio-tradis | 5 | {bio,bio-dev} | getdata | 5 | {bio} | ghmm | 5 | {bio} | jebl2 | 5 | {bio-dev} | - jellyfish1 | 5 | {bio} | king | 5 | {typesetting,imaging} | + librg-utils-perl | 5 | {bio} | obitools | 5 | {bio} | - orthanc-mysql | 5 | {imaging} | canu | 4 | {bio} | dicompyler | 4 | {oncology} | - elastix | 4 | {imaging} | - embassy-domalign | 4 | {cloud,bio} | + jellyfish1 | 4 | {bio} | lamarc | 4 | {bio} | libdivsufsort | 4 | {bio-dev} | libsbml | 4 | {bio-dev} | @@ -66,9 +64,6 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000 rdp-alignment | 4 | {bio} | runcircos-gui | 4 | {bio} | saint | 4 | {bio} | - staden | 4 | {bio} | - tracetuner | 4 | {bio} | - arden | 3 | {bio,cloud} | bart-view | 3 | {imaging} | beast-mcmc | 3 | {bio-phylogeny,bio} | biomaj3-cli | 3 | {cloud} | @@ -78,7 +73,9 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000 clonalframeml | 3 | {covid-19,bio} | clonalorigin | 3 | {bio} | delly | 3 | {covid-19,bio} | + elastix | 3 | {imaging} | embassy-domainatrix | 3 | {bio,cloud} | + embassy-domalign | 3 | {cloud,bio} | embassy-domsearch | 3 | {cloud,bio} | fastml | 3 | {bio} | gatb-core | 3 | {bio} | @@ -99,8 +96,10 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000 sift | 3 | {bio} | spread-phy | 3 | {bio-phylogeny,bio} | stacks | 3 | {bio} | - thesias | 3 | {bio,covid-19} | + staden | 3 | {bio} | + tracetuner | 3 | {bio} | anfo | 2 | {cloud,bio} | + arden | 2 | {bio,cloud} | assemblytics | 2 | {bio} | cat-bat | 2 | {bio,covid-19} | cmtk | 2 | {imaging} | @@ -118,6 +117,7 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000 sprai | 2 | {bio} | suitename | 2 | {bio} | surankco | 2 | {bio} | + thesias | 2 | {bio,covid-19} | trace2dbest | 2 | {bio} | tvc | 2 | {bio} | zalign | 2 | {cloud,bio} | @@ -142,7 +142,6 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000 srf | 1 | {bio-dev} | tophat-recondition | 1 | {bio,covid-19} | varscan | 1 | {bio,covid-19} | - vienna-rna | 1 | {covid-19,bio} | acedb | 0 | {cloud,bio} | bambamc | 0 | {bio-dev} | biojava4-live | 0 | {bio-dev} | @@ -193,8 +192,8 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000 orthanc-imagej | 0 | {imaging} | parallel-fastq-dump | 0 | {covid-19} | pbseqlib | 0 | {bio-dev} | - python-seqcluster | 0 | {covid-19,bio-dev} | python-seqcluster | 0 | {bio} | + python-seqcluster | 0 | {covid-19,bio-dev} | resfinder-db | 0 | {bio} | sbmltoolbox | 0 | {bio-dev} | shovill | 0 | {covid-19,bio} | @@ -204,6 +203,7 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000 snpeff | 0 | {bio,covid-19} | tipp | 0 | {bio,covid-19} | varna | 0 | {bio} | + vienna-rna | 0 | {covid-19,bio} | xdffileio | 0 | {imaging-dev} | xxsds-dynamic | 0 | {bio-dev} | (234 rows) ===================================== outdated_med-packages.txt ===================================== The diff for this file was not included because it is too large. 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