Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits: 65624834 by Andreas Tille at 2022-01-28T13:42:19+00:00 automatic update - - - - - 2 changed files: - debian-med-tests.txt - outdated_med-packages.txt Changes: ===================================== debian-med-tests.txt ===================================== @@ -1,72 +1,64 @@ -Last-Update: Fri, 28 Jan 2022 01:42:04 +0000 +Last-Update: Fri, 28 Jan 2022 13:42:03 +0000 Source | Vote | Tasks | Tags -------------------------------+--------+-----------------------------------------------------+---------------------------------------------------------------------- dcmtk | 181 | {covid-19,imaging} | - orthanc | 104 | {imaging,covid-19,practice} | + orthanc | 103 | {imaging,covid-19,practice} | orthanc-wsi | 55 | {practice,laboratory,covid-19,imaging,his,oncology} | - htsjdk | 36 | {bio-dev} | - dicom3tools | 29 | {imaging} | - amide | 26 | {imaging} | + htsjdk | 35 | {bio-dev} | + dicom3tools | 28 | {imaging} | dicomscope | 26 | {imaging} | - dcm2niix | 24 | {imaging} | - orthanc-webviewer | 20 | {imaging} | + dcm2niix | 25 | {imaging} | + amide | 24 | {imaging} | + orthanc-webviewer | 19 | {imaging} | ngs-sdk | 16 | {bio-dev} | + gdcm | 14 | {covid-19,imaging} | gnumed-server | 14 | {practice,covid-19} | - gdcm | 13 | {covid-19,imaging} | invesalius | 12 | {imaging} | - minc-tools | 12 | {imaging} | + minc-tools | 11 | {imaging} | adun.app | 10 | {bio} | - gdcm | 10 | {imaging-dev} | - lagan | 10 | {bio} | + gdcm | 9 | {imaging-dev} | + lagan | 9 | {bio} | mrtrix3 | 9 | {imaging} | nifti2dicom | 9 | {imaging} | orthanc-dicomweb | 9 | {imaging,covid-19} | - pixelmed | 9 | {imaging} | - biojava-live | 8 | {bio-dev} | dicomnifti | 8 | {imaging} | - libminc | 8 | {imaging-dev} | librg-utils-perl | 8 | {bio} | - mia | 8 | {imaging} | ngs-sdk | 8 | {bio-dev} | nifticlib | 8 | {imaging} | - nifticlib | 8 | {imaging-dev} | openslide | 8 | {imaging} | orthanc-postgresql | 8 | {imaging} | + pixelmed | 8 | {imaging} | + biojava-live | 7 | {bio-dev} | + libminc | 7 | {imaging-dev} | + mia | 7 | {imaging} | nifti2dicom | 7 | {imaging} | + nifticlib | 7 | {imaging-dev} | plastimatch | 7 | {imaging} | libncl | 6 | {bio} | - obitools | 6 | {bio} | - jebl2 | 5 | {bio-dev} | king | 5 | {typesetting,imaging} | libdivsufsort | 5 | {bio-dev} | nipype | 5 | {imaging-dev,imaging} | + obitools | 5 | {bio} | openslide | 5 | {imaging-dev} | orthanc-mysql | 5 | {imaging} | salmon | 5 | {bio,covid-19} | treeview | 5 | {bio-phylogeny,bio} | - arden | 4 | {bio,cloud} | - bio-tradis | 4 | {bio,bio-dev} | dicompyler | 4 | {oncology} | elastix | 4 | {imaging} | - embassy-domalign | 4 | {cloud,bio} | getdata | 4 | {bio} | ghmm | 4 | {bio} | + jebl2 | 4 | {bio-dev} | jellyfish1 | 4 | {bio} | pymia | 4 | {imaging-dev} | - spread-phy | 4 | {bio-phylogeny,bio} | staden | 4 | {bio} | tracetuner | 4 | {bio} | - anfo | 3 | {cloud,bio} | - assemblytics | 3 | {bio} | + arden | 3 | {bio,cloud} | bart-view | 3 | {imaging} | - beast-mcmc | 3 | {bio-phylogeny,bio} | - bitseq | 3 | {bio} | + bio-tradis | 3 | {bio,bio-dev} | blimps | 3 | {bio} | - brig | 3 | {bio} | canu | 3 | {bio} | - clonalorigin | 3 | {bio} | - embassy-domainatrix | 3 | {bio,cloud} | + embassy-domalign | 3 | {cloud,bio} | lamarc | 3 | {bio} | libbio-mage-utils-perl | 3 | {bio-dev} | libsbml | 3 | {bio-dev} | @@ -83,16 +75,21 @@ Last-Update: Fri, 28 Jan 2022 01:42:04 +0000 saint | 3 | {bio} | sibsim4 | 3 | {cloud,bio} | sift | 3 | {bio} | + spread-phy | 3 | {bio-phylogeny,bio} | stacks | 3 | {bio} | thesias | 3 | {bio,covid-19} | - tvc | 3 | {bio} | - zalign | 3 | {cloud,bio} | - biomaj3-cli | 2 | {cloud} | + anfo | 2 | {cloud,bio} | + assemblytics | 2 | {bio} | + beast-mcmc | 2 | {bio-phylogeny,bio} | + bitseq | 2 | {bio} | + brig | 2 | {bio} | cat-bat | 2 | {bio,covid-19} | clonalframeml | 2 | {covid-19,bio} | + clonalorigin | 2 | {bio} | cmtk | 2 | {imaging} | delly | 2 | {covid-19,bio} | dextractor | 2 | {bio,covid-19} | + embassy-domainatrix | 2 | {bio,cloud} | embassy-domsearch | 2 | {cloud,bio} | fastml | 2 | {bio} | gatb-core | 2 | {bio} | @@ -119,9 +116,13 @@ Last-Update: Fri, 28 Jan 2022 01:42:04 +0000 suitename | 2 | {bio} | surankco | 2 | {bio} | trace2dbest | 2 | {bio} | + tvc | 2 | {bio} | + zalign | 2 | {cloud,bio} | atropos | 1 | {bio} | + biomaj3-cli | 1 | {cloud} | cufflinks | 1 | {bio,cloud} | emmax | 1 | {bio} | + intake | 1 | {bio,bio-dev} | kmerresistance | 1 | {bio} | libchado-perl | 1 | {bio-dev} | libgenome | 1 | {bio-dev} | @@ -155,7 +156,6 @@ Last-Update: Fri, 28 Jan 2022 01:42:04 +0000 gifticlib | 0 | {imaging-dev} | htscodecs | 0 | {covid-19,bio-dev} | insighttoolkit5 | 0 | {imaging-dev} | - intake | 0 | {bio,bio-dev} | libbigwig | 0 | {bio-dev} | libbioparser-dev | 0 | {bio-dev} | libbpp-core | 0 | {bio-dev} | ===================================== outdated_med-packages.txt ===================================== The diff for this file was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/65624834813fa32666c75a52d24ba733506585de -- View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/65624834813fa32666c75a52d24ba733506585de You're receiving this email because of your account on salsa.debian.org.
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