This is an automated email from the git hooks/post-receive script. afif-guest pushed a commit to branch master in repository python-pbcore.
commit 74b076bf4fc88417a1b0d53d0e7cf0e4fa25d035 Merge: 10a2a68 cd3bf35 Author: Afif Elghraoui <a...@ghraoui.name> Date: Mon Aug 10 22:55:58 2015 -0700 Merge tag 'upstream/1.2.2+dfsg1' Upstream version 1.2.2+dfsg1 CHANGELOG.org | 7 + bin/dataset.py | 2 + pbcore/__init__.py | 2 +- pbcore/data/Makefile | 7 + pbcore/data/datasets/__init__.py | 6 +- pbcore/data/datasets/alignment.dataset.xml | 8 + .../datasets/m150430_142051_Mon_p1_b25.sts.xml | 1 + ...100710482550000001823136404221563_s1_p0.sts.xml | 1 + pbcore/data/datasets/pbalchemysim0.reference.xml | 79 +- pbcore/data/datasets/subreadSetWithStats.xml | 1139 +++++++++++++++- pbcore/io/FastaIO.py | 2 +- pbcore/io/align/PacBioBamIndex.py | 83 +- pbcore/io/dataset/DataSetIO.py | 1400 ++++++++++++++------ pbcore/io/dataset/DataSetMembers.py | 206 ++- pbcore/io/dataset/DataSetReader.py | 233 ++-- pbcore/io/dataset/DataSetValidator.py | 53 +- pbcore/io/dataset/DataSetWriter.py | 19 +- pbcore/io/dataset/EntryPoints.py | 53 +- pbcore/util/ToolRunner.py | 3 + tests/test_pbdataset.py | 205 ++- tests/test_pbdataset_subtypes.py | 174 ++- 21 files changed, 2996 insertions(+), 687 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-pbcore.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit