This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository subread.
commit fa0279e26dc51ea9125b4c8fe10f24663775bcbb Author: Alexandre Mestiashvili <[email protected]> Date: Sat Sep 5 13:02:33 2015 +0200 d/{control,copyright,patches/}: applied wrap-and-sort --- debian/control | 22 ++++++++++------------ debian/copyright | 2 +- debian/patches/fix_syntax.patch | 3 +-- 3 files changed, 12 insertions(+), 15 deletions(-) diff --git a/debian/control b/debian/control index ddbb62a..f524cca 100644 --- a/debian/control +++ b/debian/control @@ -6,10 +6,10 @@ Section: science Testsuite: autopkgtest Priority: optional Build-Depends: debhelper (>= 9), - zlib1g-dev, help2man, - texlive-latex-extra, texlive-bibtex-extra, + texlive-latex-extra, + zlib1g-dev Standards-Version: 3.9.6 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/subread.git Vcs-Git: git://anonscm.debian.org/debian-med/subread.git @@ -17,22 +17,20 @@ Homepage: http://sourceforge.net/projects/subread/ Package: subread Architecture: amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mipsel ppc64el -Depends: ${shlibs:Depends}, - ${misc:Depends} +Depends: ${misc:Depends}, ${shlibs:Depends} Description: toolkit for processing next-gen sequencing data Subread aligner can be used to align both gDNA-seq and RNA-seq reads. - Subjunc aligner was specified designed for the detection of exon-exon - junction. For the mapping of RNA-seq reads, Subread performs local - alignments and Subjunc performs global alignments. + Subjunc aligner was specified designed for the detection of exon-exon + junction. For the mapping of RNA-seq reads, Subread performs local + alignments and Subjunc performs global alignments. Package: subread-data Architecture: all -Depends: ${shlibs:Depends}, - ${misc:Depends} +Depends: ${misc:Depends}, ${shlibs:Depends} Description: data files for subread package This package provides data files from the original tarball: - - annotation: Directory including NCBI RefSeq gene annotations for + - annotation: Directory including NCBI RefSeq gene annotations for genomes 'hg19', 'mm10' and 'mm9'. Each row is an exon. - Entrez gene identifiers and chromosomal coordinates are provided for + Entrez gene identifiers and chromosomal coordinates are provided for each exon. - - test: Directory including test data and scripts. + - test: Directory including test data and scripts. diff --git a/debian/copyright b/debian/copyright index e07074a..ab76481 100644 --- a/debian/copyright +++ b/debian/copyright @@ -1,6 +1,6 @@ Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: subread -Source: http://sourceforge.net/projects/subread/files/ +Source: http://sourceforge.net/projects/subread/files/ Files-Excluded: doc/*.pdf Files: * diff --git a/debian/patches/fix_syntax.patch b/debian/patches/fix_syntax.patch index 15487c3..5297c76 100644 --- a/debian/patches/fix_syntax.patch +++ b/debian/patches/fix_syntax.patch @@ -1,5 +1,4 @@ -Description: Fix spelling errors -Subject: spelling-error-in-binary subread-buildindex s/sucessfully/successfully/ +Description: spelling-error-in-binary subread-buildindex s/sucessfully/successfully/ Origin: Debian Med Packaging Team <[email protected]> --- subread.orig/src/index-builder.c +++ subread/src/index-builder.c -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/subread.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
