Hi Andreas,
You probably know this, but bsub is the submission command for the LSF
computer cluster submission software. It is what the Ensembl team use
internally for batch submission.
My point is that there are many utility scripts ( like
ensembl-variation/scripts/import/run.me ) hanging about in the ensembl
code that are not needed at all in order to have a fully functioning
website and API code. They are only used internally by the Ensembl team
as they develop new data for a new release. As they are only intended
for internal use they tend to be very tied to the exact platform they
develop on ( in this case LSF, with perl in /usr/local/ensembl/bin/perl
and a shared dir on /ecs2/scratch3/ ).
My suggestion is that we just ignore this script as it is not needed for
Ensembl to run.
Thanks,
Nick
On 08/12/11 16:26, Andreas Tille wrote:
Hi Nick,
On Thu, Dec 08, 2011 at 03:56:20PM +0000, Nick James wrote:
Just a quick post to introduce myself.
...
welcome in the team. I think I had your address in CC in my mail
yesterday concerning some Ensembl issues. It would be great if you
could contact Ensembl authors about this. I hope you feel comfortable
with all the docs I just recommended - feel free to ask any question
here.
Kind regards and thanks for the introduction
Andreas.
--
To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org
with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
Archive: http://lists.debian.org/4ee0f2e3.7080...@eaglegenomics.com
