Hello Andreas,

I generated output files for run-unit-test and run-r-packages-check the
exact same way you described.

Regards, Nadiya

On Sun, Mar 26, 2017 at 1:25 PM, Andreas Tille <andr...@an3as.eu> wrote:

> Hello Nadiya,
>
> On Sat, Mar 25, 2017 at 08:31:24PM -0700, Nadiya Sitdykova wrote:
> > Thank you for instructions for using dch, I hope now I got it right.
>
> I think so (except the blank line in the beginning which was probably
> a typo).
>
> > 1) I edited patch use_debian_packaged_seqtk.patch so I guess the problem
> > with seqtk should be resolved now.
>
> Yes, this works now for me.
>
> > 2) I have this error on Ubuntu xenial, Debian jessie and after you
> > mentioned that it's better to use unstable version, I tried Debian sid
> > (amd64) and still got problems with RcppGSL.
> > That stand-alone test returns exit code 1 with message "Missing the
> > following R library RcppGSL".
>
> This is very strange.  I can confirm that there is really a problem
> if I run
>
>  LANG=C . run-unit-test 2>&1 | tee > run-unit-test.out
>
> I get the attached build log - but this does not contain the string
> Rcpp.  This needs to be investigated.
>
> > And for commented tests in run-unit-test file
> > the message is "Cannot use --stats-only with missing R libraries".
>
> I think it would be the best to stick to the not commented tests
> and make sure we get the same results.  Could you please also
> create the exact output if your test?
>
> Kind regards
>
>         Andreas.
>
> --
> http://fam-tille.de
>

Attachment: run-unit-test.out
Description: Binary data

Attachment: run-r-package-check.out
Description: Binary data

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