Le ven. 25 janv. 2019 à 09:14, olivier sallou <olivier.sal...@gmail.com> a écrit :
> > > Le jeu. 24 janv. 2019 à 17:52, Andreas Tille <andr...@an3as.eu> a écrit : > >> Hi, >> >> we updated picard-tools (there is another micro release, thought) but >> htsjdk is lagging behind upstream. I've commited the last version to >> Git but there are failing tests. Any volunteer? >> > > I fixed htsjdk and pushed fixes to git. I have not yet uploaded however, I > want to test if picard-tools still builds with this version. Will upload if > everything is ok (though some other packages depending on it may fail if > something is broken in API... as usual....) > Bad news. Building picard-tools with new htsjdk fails. Some ~40 tests are failing. Tried to rebuild picard-tools with current htsjdk (to be sure it was not related to an other updated lib), and it works. So issue is with new htsjdk. picard-tools and htsjdk are too "linked" with specific versions... ;-( It is not a compilation issue, but testing results, so I cannot detect what is the problem for picard with this new release. htsjdk code is up-to-date in git, but uploading this version would break picard-tools. Olivier > > Olivier > >> >> Kind regards >> >> Andreas. >> >> -- >> http://fam-tille.de >> > > > -- > > gpg key id: 4096R/326D8438 (keyring.debian.org) > > Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 > > -- gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438
