On Mon, 2020-06-22 at 10:57 -0300, Emmanuel Arias wrote: > Hi Andreas, > > I would be happy to help on artemis. Obviously I will need > a more experienced developer helping me. :)
do not hesitate to ask for help on mailing list, I'll keep an eye on it. I have very few spare time to manage this for now but will gladly help if possible. Olivier > > Cheers! > Emmanuel > > > > > > Cheers, > Arias Emmanuel > @eamanu > yaerobi.com > > > On Mon, Jun 22, 2020 at 9:17 AM Andreas Tille <andr...@an3as.eu> > wrote: > > Hi, > > > > we are lagging several upstream versions behind due to new > > dependencies > > and other build issues. I wonder whether somebody might volunteer > > to > > update artemis. It would be great to get the latest version at > > least > > before the freeze starts. While this takes some time I guess > > having > > latest artemis is time consuming as well - thus I'm asking here. > > > > Any takers? Despite I'm the only remaining Uploader this exceeds > > my > > current time capacity. > > > > Kind regards > > > > Andreas. > > > > On Sun, Jun 21, 2020 at 10:26:05PM +0200, Lucas Nussbaum wrote: > > > Source: artemis > > > Version: 17.0.1+dfsg-2 > > > Severity: serious > > > Justification: FTBFS on amd64 > > > Tags: bullseye sid ftbfs > > > Usertags: ftbfs-20200620 ftbfs-bullseye > > > > > > Hi, > > > > > > During a rebuild of all packages in sid, your package failed to > > build > > > on amd64. > > > > > > Relevant part (hopefully): > > > > debian/rules build > > > > dh build --with javahelper > > > > dh_update_autotools_config > > > > dh_autoreconf > > > > dh_auto_configure > > > > jh_linkjars > > > > debian/rules override_dh_auto_build > > > > make[1]: Entering directory '/<<PKGBUILDDIR>>' > > > > dh_auto_build -- jar > > > > make -j4 "INSTALL=install --strip-program=true" jar > > > > make[2]: Entering directory '/<<PKGBUILDDIR>>' > > > > CLASSPATH=/usr/share/java/biojava.jar /usr/share/java/j2ssh- > > core.jar /usr/share/java/ibatis.jar /usr/share/java/log4j-1.2.jar > > /usr/share/java/postgresql-jdbc3.jar /usr/share/java/picard.jar > > /usr/share/java/htsjdk.jar /usr/share/java/commons-net.jar > > /usr/share/java/commons-lang3.jar /usr/share/java/batik-all.jar > > /usr/share/java/batik-awt-util.jar /usr/share/java/batik-dom.jar > > /usr/share/java/batik-ext.jar /usr/share/java/batik-svggen.jar > > /usr/share/java/batik-util.jar /usr/share/java/batik-xml.jar > > /usr/share/EMBOSS/jemboss/lib/jemboss.jar /<<PKGBUILDDIR>>: javac > > -source 1.8 -target 1.8 uk/ac/sanger/artemis/Action.java > > > > CLASSPATH=/usr/share/java/biojava.jar /usr/share/java/j2ssh- > > core.jar /usr/share/java/ibatis.jar /usr/share/java/log4j-1.2.jar > > /usr/share/java/postgresql-jdbc3.jar /usr/share/java/picard.jar > > /usr/share/java/htsjdk.jar /usr/share/java/commons-net.jar > > /usr/share/java/commons-lang3.jar /usr/share/java/batik-all.jar > > /usr/share/java/batik-awt-util.jar /usr/share/java/batik-dom.jar > > /usr/share/java/batik-ext.jar /usr/share/java/batik-svggen.jar > > /usr/share/java/batik-util.jar /usr/share/java/batik-xml.jar > > /usr/share/EMBOSS/jemboss/lib/jemboss.jar /<<PKGBUILDDIR>>: javac > > -source 1.8 -target 1.8 > > uk/ac/sanger/artemis/ActionController.java > > > > /bin/sh: 1: /usr/share/java/j2ssh-core.jar: Permission denied > > > > make[2]: *** [Makefile:48: uk/ac/sanger/artemis/Action.class] > > Error 126 > > > > > > The full build log is available from: > > > > > http://qa-logs.debian.net/2020/06/20/artemis_17.0.1+dfsg-2_unstable.log > > > > > > A list of current common problems and possible solutions is > > available at > > > http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to > > contribute! > > > > > > About the archive rebuild: The rebuild was done on EC2 VM > > instances from > > > Amazon Web Services, using a clean, minimal and up-to-date > > chroot. Every > > > failed build was retried once to eliminate random failures. > > > > > > _______________________________________________ > > > Debian-med-packaging mailing list > > > debian-med-packag...@alioth-lists.debian.net > > > > > https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging > > -- Olivier Sallou Univ Rennes, Inria, CNRS, IRISA Irisa, Campus de Beaulieu F-35042 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438