Package: release.debian.org Severity: normal User: release.debian....@packages.debian.org Usertags: unblock
Please unblock package libbpp-seq libbpp-seq (2.4.1-3) unstable; urgency=medium . * Rebuild for new version of gcc to fix symbols Closes: #923954 * Standards-Version: 4.3.0 unblock libbpp-seq/2.4.1-3 -- System Information: Debian Release: 9.6 APT prefers stable-updates APT policy: (500, 'stable-updates'), (500, 'stable') Architecture: amd64 (x86_64) Kernel: Linux 4.9.0-6-amd64 (SMP w/1 CPU core) Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8), LANGUAGE=de_DE.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system)
diff -Nru libbpp-seq-2.4.1/debian/changelog libbpp-seq-2.4.1/debian/changelog --- libbpp-seq-2.4.1/debian/changelog 2018-12-03 08:15:45.000000000 +0100 +++ libbpp-seq-2.4.1/debian/changelog 2019-03-07 18:56:16.000000000 +0100 @@ -1,3 +1,11 @@ +libbpp-seq (2.4.1-3) unstable; urgency=medium + + * Rebuild for new version of gcc to fix symbols + Closes: #923954 + * Standards-Version: 4.3.0 + + -- Andreas Tille <ti...@debian.org> Thu, 07 Mar 2019 18:56:16 +0100 + libbpp-seq (2.4.1-2) unstable; urgency=medium [ Jelmer Vernooij ] diff -Nru libbpp-seq-2.4.1/debian/control libbpp-seq-2.4.1/debian/control --- libbpp-seq-2.4.1/debian/control 2018-12-03 08:15:45.000000000 +0100 +++ libbpp-seq-2.4.1/debian/control 2019-03-07 18:56:16.000000000 +0100 @@ -8,7 +8,7 @@ cmake, d-shlibs (>= 0.80), libbpp-core-dev (>= 2.4.1) -Standards-Version: 4.2.1 +Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/libbpp-seq Vcs-Git: https://salsa.debian.org/med-team/libbpp-seq.git Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page diff -Nru libbpp-seq-2.4.1/debian/libbpp-seq12.symbols libbpp-seq-2.4.1/debian/libbpp-seq12.symbols --- libbpp-seq-2.4.1/debian/libbpp-seq12.symbols 2018-12-03 08:15:45.000000000 +0100 +++ libbpp-seq-2.4.1/debian/libbpp-seq12.symbols 2019-03-07 18:56:16.000000000 +0100 @@ -328,7 +328,6 @@ _ZN3bpp16AbstractAlphabet8getStateERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 2.4.1 _ZN3bpp16AbstractAlphabet8getStateEi@Base 2.4.1 _ZN3bpp16AbstractAlphabet8setStateEmPNS_13AlphabetStateE@Base 2.4.1 - _ZN3bpp16AbstractAlphabetC2ERKS0_@Base 2.4.1 _ZN3bpp16AbstractAlphabetD2Ev@Base 2.4.1 _ZN3bpp16AbstractCoreSite11setPositionEi@Base 2.4.1 _ZN3bpp16ApplicationTools12getParameterIjEET_RKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKSt3mapIS8_S8_St4lessIS8_ESaISt4pairIS9_S8_EEES2_SA_bi@Base 2.4.1 @@ -1710,13 +1709,13 @@ _ZNKSt5ctypeIcE8do_widenEc@Base 2.4.1 _ZNKSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE4findERS7_@Base 2.4.1 _ZNKSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE4findERS7_@Base 2.4.1 + _ZNSt11_Deque_baseINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base 2.4.1 + _ZNSt11_Deque_baseINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base 2.4.1 _ZNSt11_Deque_baseIiSaIiEE17_M_initialize_mapEm@Base 2.4.1 _ZNSt11_Deque_baseIiSaIiEED1Ev@Base 2.4.1 _ZNSt11_Deque_baseIiSaIiEED2Ev@Base 2.4.1 _ZNSt13_Bvector_baseISaIbEE13_M_deallocateEv@Base 2.4.1 _ZNSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St4lessIS5_ESaISt4pairIKS5_S5_EEEixEOS5_@Base 2.4.1 - _ZNSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St4lessIS5_ESaISt4pairIKS5_S5_EEEixERS9_@Base 2.4.1 - _ZNSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorImSaImEESt4lessIS5_ESaISt4pairIKS5_S8_EEEixERSC_@Base 2.4.1 _ZNSt3mapIiiSt4lessIiESaISt4pairIKiiEEEixEOi@Base 2.4.1 _ZNSt5dequeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base 2.4.1 _ZNSt5dequeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base 2.4.1 @@ -1813,7 +1812,6 @@ _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE11equal_rangeERS7_@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE12_M_erase_auxESt23_Rb_tree_const_iteratorISB_E@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSJ_PSt13_Rb_tree_nodeISB_E@Base 2.4.1 - (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE16_M_insert_uniqueIS6_IS5_SA_EEES6_ISt17_Rb_tree_iteratorISB_EbEOT_@Base 2.4.1 (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE17_M_emplace_uniqueIJS6_IS5_SA_EEEES6_ISt17_Rb_tree_iteratorISB_EbEDpOT_@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS7_EESM_IJEEEEESt17_Rb_tree_iteratorISB_ESt23_Rb_tree_const_iteratorISB_EDpOT_@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base 2.4.1 @@ -1851,6 +1849,7 @@ _ZNSt8_Rb_treeIcSt4pairIKcdESt10_Select1stIS2_ESt4lessIcESaIS2_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 _ZNSt8_Rb_treeIcSt4pairIKcdESt10_Select1stIS2_ESt4lessIcESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base 2.4.1 _ZNSt8_Rb_treeIcSt4pairIKcdESt10_Select1stIS2_ESt4lessIcESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base 2.4.1 + _ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_@Base 2.4.1 _ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 _ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base 2.4.1 _ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE7_M_copyINS8_11_Alloc_nodeEEEPSt13_Rb_tree_nodeIS2_EPKSC_PSt18_Rb_tree_node_baseRT_@Base 2.4.1 @@ -1873,6 +1872,7 @@ _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE7_M_copyINS8_11_Alloc_nodeEEEPSt13_Rb_tree_nodeIS2_EPKSC_PSt18_Rb_tree_node_baseRT_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSA_PSt13_Rb_tree_nodeIS2_E@Base 2.4.1 + _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJOiEESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base 2.4.1 @@ -1884,10 +1884,10 @@ _ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS5_ERS1_@Base 2.4.1 _ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE8_M_eraseEPSt13_Rb_tree_nodeIS5_E@Base 2.4.1 _ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSA_PSt13_Rb_tree_nodeIS2_E@Base 2.4.1 + _ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJOmEESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_@Base 2.4.1 _ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 _ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base 2.4.1 _ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base 2.4.1 - _ZSt11__remove_ifIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEENS0_5__ops16_Iter_equals_valIKiEEET_SB_SB_T0_@Base 2.4.1 _ZSt13__adjust_heapIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEElS5_NS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_T0_SH_T1_T2_@Base 2.4.1 _ZSt16__insertion_sortIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEENS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_SG_T0_@Base 2.4.1 _ZSt16__introsort_loopIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEElNS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_SG_T0_T1_@Base 2.4.1 @@ -2460,7 +2460,6 @@ _ZTVN3bpp7ClustalE@Base 2.4.1 _ZTVN3bpp7GenBankE@Base 2.4.1 _ZTVN3bpp8BLOSUM50E@Base 2.4.1 - _ZTVN3bpp8ClonableE@Base 2.4.1 _ZTVN3bpp8DNAToRNAE@Base 2.4.1 _ZTVN3bpp8PhredPhdE@Base 2.4.1 _ZTVN3bpp9PhredPolyE@Base 2.4.1