----------------------------------------------------------- This is an automatically generated e-mail. To reply, visit: https://reviews.apache.org/r/11565/ -----------------------------------------------------------
(Updated June 5, 2013, 2:35 a.m.) Review request for oodt, Chris Mattmann, Suresh Srinivas, and Shahani Weerawarana. Description ------- I have worked on the Apache Airavata integration with Apache OODT. As a first step, I have implemented integration with Apache OODT file manager component. 1. Introduce a new GFac Schema type called OODTProduct which takes APache OODT product IDs as input. 2. Implemented new pre GFac Handler by extending Apache OODT PgeTaskInstance to stage the corresponding file into the working directory. 3. Once file is staged, input parameter with OODT product id is replaced with path of the staged file for downstream processing I have tested the implementation with Gfac application which wraps /bin/ls command. Application takes product id as input and stage corresponding file into the working directory and /bin/ls is executed against the staged file. Hope this is a valid testing scenario. Concerns - Configurations : I have added new configuration file named and oodt-integration.properties in addition to dynamic_metadata.met and pge-config.xml files used by OODT. But at the moment there is no item configured with the oodt-integration.properties. - Staged File Name - With the current implementation of PgeTaskInstance it is not possible to retrieve path of the staged file. Due to this limitation, I have query the FileManagerServer with product id and retrieve the file name and computed the file path using information of working directory. - Currently it is not possible to execute the workflow using Xbaya due to validation failure due to new schema type. I have commented out the relevant validation code for testing purpose. Diffs ----- https://svn.apache.org/repos/asf/airavata/trunk/modules/commons/gfac-schema/src/main/java/org/apache/airavata/commons/gfac/type/MappingFactory.java 1487802 https://svn.apache.org/repos/asf/airavata/trunk/modules/commons/gfac-schema/src/main/resources/schemas/GFacParameterTypes.xsd 1487802 https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/pom.xml 1487802 https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/src/main/assembly/bin-assembly.xml 1487802 https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/src/main/resources/conf/dynamic_metadata.met PRE-CREATION https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/src/main/resources/conf/gfac-config.xml 1487802 https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/src/main/resources/conf/oodt_integration.properties PRE-CREATION https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/src/main/resources/conf/pge-config.xml PRE-CREATION https://svn.apache.org/repos/asf/airavata/trunk/modules/gfac-core/src/main/java/org/apache/airavata/gfac/utils/GFacUtils.java 1487802 https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/pom.xml PRE-CREATION https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/src/main/java/org/apache/airavata/oodt/integration/file/staging/ApacheAiravataToApacheOODTConfigurationMapper.java PRE-CREATION https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/src/main/java/org/apache/airavata/oodt/integration/file/staging/ApacheAiravataWorkFlowInstance.java PRE-CREATION https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/src/main/java/org/apache/airavata/oodt/integration/file/staging/ApacheAiravataWorkFlowInstanceImpl.java PRE-CREATION https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/src/main/java/org/apache/airavata/oodt/integration/file/staging/OODTProduct.java PRE-CREATION https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/src/main/java/org/apache/airavata/oodt/integration/file/staging/OODTProductStager.java PRE-CREATION https://svn.apache.org/repos/asf/airavata/trunk/modules/workflow-model/workflow-model-core/src/main/java/org/apache/airavata/workflow/model/component/ws/WSComponent.java 1487802 https://svn.apache.org/repos/asf/airavata/trunk/modules/workflow-model/workflow-model-core/src/main/java/org/apache/airavata/workflow/model/gpel/script/WorkflowWSDL.java 1487802 https://svn.apache.org/repos/asf/airavata/trunk/modules/workflow-model/workflow-model-core/src/main/java/org/apache/airavata/workflow/model/xsd/GFacSimpleTypesXSD.java 1487802 https://svn.apache.org/repos/asf/airavata/trunk/modules/xbaya-gui/src/main/java/org/apache/airavata/xbaya/lead/LEADTypes.java 1487802 https://svn.apache.org/repos/asf/airavata/trunk/pom.xml 1487802 Diff: https://reviews.apache.org/r/11565/diff/ Testing ------- Thanks, Sanjaya Medonsa