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This is an automatically generated e-mail. To reply, visit:
https://reviews.apache.org/r/11565/
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(Updated June 12, 2013, 1:12 a.m.)
Review request for Airavata, oodt, Chris Mattmann, Suresh Srinivas, and Shahani
Weerawarana.
Changes
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Added Airavata into review group
Description
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I have worked on the Apache Airavata integration with Apache OODT. As a first
step, I have implemented integration with Apache OODT file manager component.
1. Introduce a new GFac Schema type called OODTProduct which takes APache
OODT product IDs as input.
2. Implemented new pre GFac Handler by extending Apache OODT
PgeTaskInstance to stage the corresponding file into the working directory.
3. Once file is staged, input parameter with OODT product id is replaced
with path of the staged file for downstream processing
I have tested the implementation with Gfac application which wraps /bin/ls
command. Application takes product id as input and stage corresponding file
into the working directory and /bin/ls is executed against the staged file.
Hope this is a valid testing scenario.
Concerns
- Configurations : I have added new configuration file named and
oodt-integration.properties in addition to dynamic_metadata.met and
pge-config.xml files used by OODT. But at the moment there is no item
configured with the oodt-integration.properties.
- Staged File Name - With the current implementation of PgeTaskInstance it is
not possible to retrieve path of the staged file. Due to this limitation, I
have query the FileManagerServer with product id and retrieve the file name and
computed the file path using information of working directory.
- Currently it is not possible to execute the workflow using Xbaya due to
validation failure due to new schema type. I have commented out the relevant
validation code for testing purpose.
Diffs
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https://svn.apache.org/repos/asf/airavata/trunk/modules/commons/gfac-schema/src/main/java/org/apache/airavata/commons/gfac/type/MappingFactory.java
1487802
https://svn.apache.org/repos/asf/airavata/trunk/modules/commons/gfac-schema/src/main/resources/schemas/GFacParameterTypes.xsd
1487802
https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/pom.xml
1487802
https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/src/main/assembly/bin-assembly.xml
1487802
https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/src/main/resources/conf/dynamic_metadata.met
PRE-CREATION
https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/src/main/resources/conf/gfac-config.xml
1487802
https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/src/main/resources/conf/oodt_integration.properties
PRE-CREATION
https://svn.apache.org/repos/asf/airavata/trunk/modules/distribution/airavata-server/src/main/resources/conf/pge-config.xml
PRE-CREATION
https://svn.apache.org/repos/asf/airavata/trunk/modules/gfac-core/src/main/java/org/apache/airavata/gfac/utils/GFacUtils.java
1487802
https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/pom.xml
PRE-CREATION
https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/src/main/java/org/apache/airavata/oodt/integration/file/staging/ApacheAiravataToApacheOODTConfigurationMapper.java
PRE-CREATION
https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/src/main/java/org/apache/airavata/oodt/integration/file/staging/ApacheAiravataWorkFlowInstance.java
PRE-CREATION
https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/src/main/java/org/apache/airavata/oodt/integration/file/staging/ApacheAiravataWorkFlowInstanceImpl.java
PRE-CREATION
https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/src/main/java/org/apache/airavata/oodt/integration/file/staging/OODTProduct.java
PRE-CREATION
https://svn.apache.org/repos/asf/airavata/trunk/modules/oodt-integration/src/main/java/org/apache/airavata/oodt/integration/file/staging/OODTProductStager.java
PRE-CREATION
https://svn.apache.org/repos/asf/airavata/trunk/modules/workflow-model/workflow-model-core/src/main/java/org/apache/airavata/workflow/model/component/ws/WSComponent.java
1487802
https://svn.apache.org/repos/asf/airavata/trunk/modules/workflow-model/workflow-model-core/src/main/java/org/apache/airavata/workflow/model/gpel/script/WorkflowWSDL.java
1487802
https://svn.apache.org/repos/asf/airavata/trunk/modules/workflow-model/workflow-model-core/src/main/java/org/apache/airavata/workflow/model/xsd/GFacSimpleTypesXSD.java
1487802
https://svn.apache.org/repos/asf/airavata/trunk/modules/xbaya-gui/src/main/java/org/apache/airavata/xbaya/lead/LEADTypes.java
1487802
https://svn.apache.org/repos/asf/airavata/trunk/pom.xml 1487802
Diff: https://reviews.apache.org/r/11565/diff/
Testing
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Thanks,
Sanjaya Medonsa
