Hi Ralph, Thanks for pointing me to this. I've done that and although configure does not report any errors, make won't build with following errors
Making all in mca/pmix/ext3x make[2]: Entering directory '/lustre/z04/openmpi-4.0.1/opal/mca/pmix/ext3x' CC mca_pmix_ext3x_la-ext3x_local.lo CC mca_pmix_ext3x_la-ext3x.lo CC mca_pmix_ext3x_la-ext3x_client.lo CC mca_pmix_ext3x_la-ext3x_component.lo In file included from ext3x_local.c:21: ext3x.h:35:10: fatal error: pmix_server.h: No such file or directory #include "pmix_server.h" ^~~~~~~~~~~~~~~ My configure options are as follow ./configure --prefix=/lustre/z04/ompi_slurm --with-pmix=/lustre/z04/pmix --with-pmi=/lustre/z04/pmix --with-slurm --with-cuda=/lustre/sw/nvidia/hpcsdk/Linux_x86_64/cuda/10.1/include/ --with-libevent=/lustre/z04/pmix/libevent/ and I can see the that header file in the pmix built: $ls /lustre/z04/pmix/include/ pmi2.h pmix_common.h pmix.h pmix_server.h pmix_version.h pmi.h pmix_extend.h pmix_rename.h pmix_tool.h What am I missing? Cheers, Luis On 05/08/2020 15:21, Ralph Castain via devel wrote: > For OMPI, I would recommend installing PMIx: > https://github.com/openpmix/openpmix/releases/tag/v3.1.5 > > >> On Aug 5, 2020, at 12:40 AM, Luis Cebamanos via devel >> <devel@lists.open-mpi.org> wrote: >> >> Hi all, >> >> We are trying to install OpenMPI with Slurm support on a recently >> upgraded system. Unfortunately libpmi, libpmi2 or limpix don't seem to >> be available. Could I install these libraries myself to build OpenMPI >> and run it with Slurm? If so, which one would be needed? I guess these >> libraries should have been installed and made available whith the Slurm >> installation, but unfortunately they had not... >> >> checking for pmi.h... yes >> checking for libpmi in /usr/include/slurm/lib... checking for libpmi in >> /usr/include/slurm/lib64... not found >> checking for pmi2.h in /usr/include/slurm... found >> checking pmi2.h usability... yes >> checking pmi2.h presence... yes >> checking for pmi2.h... yes >> checking for libpmi2 in /usr/include/slurm/lib... checking for libpmi2 >> in /usr/include/slurm/lib64... not found >> checking for pmix.h in /usr/include/slurm... not found >> checking for pmix.h in /usr/include/slurm/include... not found >> checking can PMI support be built... no >> configure: WARNING: PMI support requested (via --with-pmi) but neither >> pmi.h, >> configure: WARNING: pmi2.h or pmix.h were found under locations: >> configure: WARNING: /usr/include/slurm >> configure: WARNING: /usr/include/slurm/slurm >> configure: WARNING: Specified path: /usr/include/slurm >> configure: WARNING: OR neither libpmi, libpmi2, or libpmix were found under: >> configure: WARNING: /lib >> configure: WARNING: /lib64 >> >> >> Regards, >> Luis >> >> The University of Edinburgh is a charitable body, registered in Scotland, >> with registration number SC005336. >> <pEpkey.asc> > -- ~~~~~~~~~~~~~~~~~~~~~~~~~ | EPCC | ~~~~~~~~~~~~~~~~~~~~~~~~~ Luis Cebamanos, HPC Applications Consultant Email: l.cebama...@epcc.ed.ac.uk Phone: +44 (0) 131 651 3479 http://www.epcc.ed.ac.uk/ The Bayes Centre, 47 Potterrow, Edinburgh UK EH8 9BT ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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