Johan Hake wrote:
> Hello!
>
> There have been reported some trubles with compiling trilinos. Especially
> version 8.0.5. I have now downloaded 8.0.7 and compiled this without
> problems, on Ubuntu Hardy.
>
> Both with and without mpi.
>
> Compile flags for MPI:
> ../configure --prefix=<install_dir> --enable-shared --enable-pytrilinos\
> --enable-pliris --enable-didasko --enable-amesos --enable-anasazi\
> --enable-default-packages --enable-galeri --with-cflags=-fPIC\
> --with-cxxflags=-fPIC --with-fflags=-fPIC --with-ldflags=-fPIC\
> --with-ccflags=-fPIC --enable-triutils --enable-aztecoo-teuchos\
> --enable-mpi --with-mpi-compilers --with-gnumake -C
>
Unfortunately this didn't work for me. I get a bunch of errors.
Garth
Teuchos_wrap.o: In function `typecode_string(int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3124:
multiple definition of `typecode_string(int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:3877:
first defined here
Teuchos_wrap.o: In function `type_match(int, int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3141:
multiple definition of `type_match(int, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:3894:
first defined here
Teuchos_wrap.o: In function `SWIG_TypePrettyName':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:486:
multiple definition of `PyTrilinos'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:487:
first defined here
Teuchos_wrap.o: In function `make_contiguous(PyArrayObject*, int*, int,
int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3211:
multiple definition of `make_contiguous(PyArrayObject*, int*, int, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:3964:
first defined here
Teuchos_wrap.o: In function `require_native(PyArrayObject*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3278:
multiple definition of `require_native(PyArrayObject*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:4031:
first defined here
Teuchos_wrap.o: In function `require_contiguous(PyArrayObject*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3262:
multiple definition of `require_contiguous(PyArrayObject*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:4015:
first defined here
Teuchos_wrap.o: In function `require_dimensions(PyArrayObject*, int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3295:
multiple definition of `require_dimensions(PyArrayObject*, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:4048:
first defined here
Teuchos_wrap.o: In function `obj_to_array_allow_conversion(_object*,
int, int*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3185:
multiple definition of `obj_to_array_allow_conversion(_object*, int, int*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:3938:
first defined here
Teuchos_wrap.o: In function
`obj_to_array_contiguous_allow_conversion(_object*, int, int*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3237:
multiple definition of
`obj_to_array_contiguous_allow_conversion(_object*, int, int*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:3990:
first defined here
Teuchos_wrap.o: In function `Finalize()':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:4341:
multiple definition of `Finalize()'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:4764:
first defined here
Teuchos_wrap.o: In function `Init_Argv(_object*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:4298:
multiple definition of `Init_Argv(_object*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:4721:
first defined here
Teuchos_wrap.o: In function `require_size(PyArrayObject*, int*, int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3346:
multiple definition of `require_size(PyArrayObject*, int*, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:4099:
first defined here
Teuchos_wrap.o: In function `require_dimensions_n(PyArrayObject*, int*,
int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3313:
multiple definition of `require_dimensions_n(PyArrayObject*, int*, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:4066:
first defined here
Teuchos_wrap.o: In function `pytype_string(_object*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3105:
multiple definition of `pytype_string(_object*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:3858:
first defined here
Teuchos_wrap.o: In function `obj_to_array_no_conversion(_object*, int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Teuchos_wrap.cpp:3150:
multiple definition of `obj_to_array_no_conversion(_object*, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../src/Epetra_wrap.cpp:3903:
first defined here
Teuchos_wrap.o: In function `SWIG_TypePrettyName':
/usr/local/include/openmpi/ompi/mpi/cxx/win_inln.h:118: multiple
definition of `NumPyImporter::m_singleton'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/epetra/src/Epetra_Util.h:179:
first defined here
collect2: ld returned 1 exit status
Traceback (most recent call last):
File "./setup.py", line 172, in <module>
###################
File "./setup.py", line 148, in main
# Build the init file
File "../util/SharedUtils.py", line 475, in buildShared
SharedTrilinosBuilder.buildShared(self)
File "../util/SharedUtils.py", line 330, in buildShared
runCommand(self.linkCmd)
File "../util/SharedUtils.py", line 97, in runCommand
if status: raise RuntimeError, "Exit status = %d" % status
RuntimeError: Exit status = 256
>
> Compile flags for serial:
> ../configure --prefix=<install_dir> --enable-shared --enable-pytrilinos\
> --enable-pliris --enable-didasko --enable-amesos --enable-anasazi\
> --enable-default-packages --enable-galeri --with-cflags=-fPIC\
> --with-cxxflags=-fPIC --with-fflags=-fPIC --with-ldflags=-fPIC\
> --with-ccflags=-fPIC --enable-triutils --enable-aztecoo-teuchos\
> --with-gnumake -C
>
> Have fun!
>
> Johan
> _______________________________________________
> DOLFIN-dev mailing list
> [email protected]
> http://www.fenics.org/mailman/listinfo/dolfin-dev
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