On Thu, July 30, 2009 21:12, Harish Narayanan wrote: > Johannes Ring wrote: >> On Mon, June 29, 2009 01:43, Harish Narayanan wrote: >>> Ilmar Wilbers wrote: >>>> The problem is because of the XML validation functions. Those have >>>> been >>>> part of libxml since 2006, so Leopard uses a very old version. We >>>> fixed >>>> this on the Mac buildbot by making sure all environment variables from >>>> Fink come before the others (DYLD_LIBRARY_PATH etc). >> >> Actually, /sw/lib is not in DYLD_LIBRARY_PATH on the buildbot. Only >> PATH, >> PYTHONPATH, and PKG_CONFIG_PATH are prepended with Fink related paths. >> >>> Could the build system be modified to look for these in the fink paths >>> before the system path on darwin? >> >> I'm not sure if it is a good idea to force any particular order on the >> build system flags that we get from the pkg-config files. I guess the >> problem is that both -L/sw/lib and -L/usr/lib is being used when >> building >> DOLFIN? Is both really needed? On the buildbot only -L/sw/lib is used. > > I know it has been a while, but could you try this (or show me what I > must change to only pass -L/sw/lib, -I/sw/lib)? I run into this problem > every time I clone a fresh copy of dolfin.
You need to make sure that none of the pkg-config files used by DOLFIN contains -I/usr/include or -L/usr/lib. Remove /usr/lib/pkgconfig from $PKG_CONFIG_PATH (if present) and make sure that pkg-config from fink is first in $PATH. If you still have -I/usr/include or -L/usr/lib on the compile line you need to figure out where they are added. It might be added by mpic++. Try to disable MPI. Maybe you also need to use a different compiler. On the mac buildslave we use gcc 4.3.3 from fink. Johannes _______________________________________________ DOLFIN-dev mailing list DOLFIN-dev@fenics.org http://www.fenics.org/mailman/listinfo/dolfin-dev
