Oh, man, that's completely my fault. You'll need to also remove the constraint
$metadatavalue_item_id_fkey. That's just a piece of dross put in by my
from-memory, incorrect attempt at the rename. After that's deleted, the
migration should be able to continue.
B--
From: Keith Jones [mailto:mad...@udel.edu]
Sent: Tuesday, March 17, 2015 2:20 PM
To: Brian Freels-Stendel
Cc: dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] Flyway Migration Error
Brian,
Thanks for the information, I've made some headway but I'm not getting a
different error:
I ran the dspace databse info whith these results:
Database URL: jdbc:postgresql://localhost:5432/dspace
Database Schema: public
Database Software: PostgreSQL version 9.4.0
Database Driver: PostgreSQL Native Driver version PostgreSQL 9.1 JDBC4 (build
901)
+----------------+----------------------------+---------------------+---------+
| Version | Description | Installed on | State |
+----------------+----------------------------+---------------------+---------+
| 1.1 | Initial DSpace 1.1 databas | | PreInit |
| 1.2 | Upgrade to DSpace 1.2 sche | | PreInit |
| 1.3 | Upgrade to DSpace 1.3 sche | | PreInit |
| 1.3.9 | Drop constraint for DSpace | | PreInit |
| 1.4 | Upgrade to DSpace 1.4 sche | | PreInit |
| 1.5 | Upgrade to DSpace 1.5 sche | | PreInit |
| 1.5.9 | Drop constraint for DSpace | | PreInit |
| 1.6 | Upgrade to DSpace 1.6 sche | | PreInit |
| 1.7 | Upgrade to DSpace 1.7 sche | | PreInit |
| 1.8 | Upgrade to DSpace 1.8 sche | | PreInit |
| 3.0 | Initializing from DSpace 3 | 2015-03-17 13:59:38 | Success |
| 4.0 | Upgrade to DSpace 4.x sche | 2015-03-17 13:59:38 | Success |
| 5.0.2014.08.08 | DS-1945 Helpdesk Request a | 2015-03-17 13:59:39 | Success |
| 5.0.2014.09.25 | DS 1582 Metadata For All O | 2015-03-17 16:09:57 | Success |
| 5.0.2014.09.26 | DS-1582 Metadata For All O | | Pending |
+----------------+----------------------------+---------------------+---------+
And the log file is reporting the following:
2015-03-17 16:14:29,319 ERROR org.dspace.storage.rdbms.DatabaseManager @ SQL
getDataSource Error -
java.sql.SQLException: Flyway migration error occurred
at
org.dspace.storage.rdbms.DatabaseUtils.updateDatabase(DatabaseUtils.java:430)
at
org.dspace.storage.rdbms.DatabaseUtils.updateDatabase(DatabaseUtils.java:338)
at
org.dspace.storage.rdbms.DatabaseManager.initialize(DatabaseManager.java:1373)
at
org.dspace.storage.rdbms.DatabaseManager.getDataSource(DatabaseManager.java:650)
at
org.dspace.storage.rdbms.DatabaseManager.getConnection(DatabaseManager.java:629)
at org.dspace.core.Context.init(Context.java:121)
at org.dspace.core.Context.<init>(Context.java:95)
at
org.dspace.app.util.AbstractDSpaceWebapp.register(AbstractDSpaceWebapp.java:79)
at
org.dspace.app.util.DSpaceContextListener.contextInitialized(DSpaceContextListener.java:128
)
at
org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4791)
at
org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5285)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at
org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:901)
at
org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:877)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:633)
at
org.apache.catalina.startup.HostConfig.deployDirectory(HostConfig.java:1114)
at
org.apache.catalina.startup.HostConfig$DeployDirectory.run(HostConfig.java:1673)
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
at java.util.concurrent.FutureTask.run(FutureTask.java:166)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
at java.lang.Thread.run(Thread.java:722)
Caused by: org.flywaydb.core.internal.dbsupport.FlywaySqlScriptException: Error
executing statement at
line 34: INSERT INTO metadatavalue (resource_id, resource_type_id,
metadata_field_id, text_value, tex
t_lang, place)
SELECT
community_id AS resource_id,
4 AS resource_type_id,
(select metadata_field_id from metadatafieldregistry where
metadata_schema_id=(select metadata_schema_
id from metadataschemaregistry where short_id='dc') and element = 'description'
and qualifier is null)
AS metadata_field_id,
introductory_text AS text_value,
null AS text_lang,
0 AS place
FROM community where not introductory_text is null
at
org.flywaydb.core.internal.dbsupport.SqlScript.execute(SqlScript.java:91)
at
org.flywaydb.core.internal.resolver.sql.SqlMigrationExecutor.execute(SqlMigrationExecutor.j
ava:73)
at
org.flywaydb.core.internal.command.DbMigrate$5.doInTransaction(DbMigrate.java:287)
at
org.flywaydb.core.internal.command.DbMigrate$5.doInTransaction(DbMigrate.java:285)
at
org.flywaydb.core.internal.util.jdbc.TransactionTemplate.execute(TransactionTemplate.java:7
2)
at
org.flywaydb.core.internal.command.DbMigrate.applyMigration(DbMigrate.java:285)
at
org.flywaydb.core.internal.command.DbMigrate.access$800(DbMigrate.java:46)
at
org.flywaydb.core.internal.command.DbMigrate$2.doInTransaction(DbMigrate.java:207)
at
org.flywaydb.core.internal.command.DbMigrate$2.doInTransaction(DbMigrate.java:156)
at
org.flywaydb.core.internal.util.jdbc.TransactionTemplate.execute(TransactionTemplate.java
2)
at
org.flywaydb.core.internal.command.DbMigrate.migrate(DbMigrate.java:156)
at org.flywaydb.core.Flyway$1.execute(Flyway.java:864)
at org.flywaydb.core.Flyway$1.execute(Flyway.java:811)
at org.flywaydb.core.Flyway.execute(Flyway.java:1171)
at org.flywaydb.core.Flyway.migrate(Flyway.java:811)
at
org.dspace.storage.rdbms.DatabaseUtils.updateDatabase(DatabaseUtils.java:419)
... 22 more
Caused by: org.postgresql.util.PSQLException: ERROR: insert or update on table
"metadatavalue" violate
s foreign key constraint "$metadatavalue_item_id_fkey"
Detail: Key (resource_id)=(38) is not present in table "item".
at
org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse(QueryExecutorImpl.java:2103)
at
org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImpl.java:1836)
at
org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:257)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:512)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.executeWithFlags(AbstractJdbc2Statement.java:37
4)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:366)
at
org.apache.commons.dbcp.DelegatingStatement.execute(DelegatingStatement.java:264)
at
org.apache.commons.dbcp.DelegatingStatement.execute(DelegatingStatement.java:264)
at
org.apache.commons.dbcp.DelegatingStatement.execute(DelegatingStatement.java:264)
at
org.flywaydb.core.internal.dbsupport.JdbcTemplate.executeStatement(JdbcTemplate.java:235)
at
org.flywaydb.core.internal.dbsupport.SqlScript.execute(SqlScript.java:89)
... 37 more
Something still seems to be off with the metadatavalues. This database goes all
the back to 1.4, I think.
Any additional help will be greatly appreciated.
Thanks
Keith
On Tue, Mar 17, 2015 at 3:59 PM, Brian Freels-Stendel
<bfre...@unm.edu<mailto:bfre...@unm.edu>> wrote:
Hi,
I was wrong in the new name: it should not have a $ in front of it, just
metadatavalue_item_id_fkey
In a very old version of SQLManager, this is the SQL it says it's going to run:
ALTER TABLE "public"."metadatavalue"
DROP CONSTRAINT "$1" RESTRICT;
ALTER TABLE "public"."metadatavalue"
ADD CONSTRAINT "metadatavalue_item_id_fkey" FOREIGN KEY ("item_id")
REFERENCES "public"."item"("item_id")
ON DELETE NO ACTION
ON UPDATE NO ACTION
NOT DEFERRABLE;
Sorry about the typo, and here's hoping!
B--
From: Keith Jones [mailto:mad...@udel.edu<mailto:mad...@udel.edu>]
Sent: Tuesday, March 17, 2015 1:53 PM
To: Brian Freels-Stendel
Cc: dspace-tech@lists.sourceforge.net<mailto:dspace-tech@lists.sourceforge.net>
Subject: Re: [Dspace-tech] Flyway Migration Error
Brian,
Thanks for the reply.
UI used both of the lines you provided in and each time postgres said the table
was altered, but when I ran the migration tool again I was meet with the same
error.
Keith
On Tue, Mar 17, 2015 at 3:38 PM, Brian Freels-Stendel
<bfre...@unm.edu<mailto:bfre...@unm.edu>> wrote:
Hi Keith,
You'll need to update the foreign key constraint. My bet is that it's named
"$1" right now, but it needs to be named "metadatavalue_item_id_fkey".
I think the SQL would be
"alter table metadatavalue drop constraint '$1';"
followed by
"alter table metadatavalue add constraint '$metadatavalue_item_id_fkey' foreign
key ('item_id') references item ('item_id') on delete no action on update no
action;"
But you'll really want to make a backup first!
I think some of us with databases dating back to the early days have auto-named
constraints, and they're breaking the flyway stuff.
B--
From: Keith Jones [mailto:mad...@udel.edu<mailto:mad...@udel.edu>]
Sent: Tuesday, March 17, 2015 12:56 PM
To: dspace-tech@lists.sourceforge.net<mailto:dspace-tech@lists.sourceforge.net>
Subject: [Dspace-tech] Flyway Migration Error
Hi All,
I'm currently attempting to upgrade from dspace version 3.2 to dspace version
5.1 but I'm getting a java.sql.SQLException which is leading to a black page:
Here's what I have installed
OS : Solaris
Java: 1.7.0_11
Maven: 3.2.3
Ant: 1.8.2
Postgres: 9.4
Tomcat: 7.0.34
I'm able to both build and compile without error, I've deployed both xmlui and
solr into the webapps area.
Here is the error I'm getting in the logfile:
2015-03-17 14:03:48,848 ERROR org.dspace.storage.rdbms.DatabaseManager @ SQL
getDataSource Error -
java.sql.SQLException: Flyway migration error occurred
at
org.dspace.storage.rdbms.DatabaseUtils.updateDatabase(DatabaseUtils.java:430)
at
org.dspace.storage.rdbms.DatabaseUtils.updateDatabase(DatabaseUtils.java:338)
at
org.dspace.storage.rdbms.DatabaseManager.initialize(DatabaseManager.java:1373)
at
org.dspace.storage.rdbms.DatabaseManager.getDataSource(DatabaseManager.java:650)
at
org.dspace.storage.rdbms.DatabaseManager.getConnection(DatabaseManager.java:629)
at org.dspace.core.Context.init(Context.java:121)
at org.dspace.core.Context.<init>(Context.java:95)
at org.dspace.browse.IndexBrowse.main(IndexBrowse.java:637)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at
org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.java:225)
at org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:77)
Caused by: org.flywaydb.core.api.FlywayException: Migration failed !
at
org.flywaydb.core.internal.resolver.jdbc.JdbcMigrationExecutor.execute(JdbcMigrationExecuto
r.java:47)
at
org.flywaydb.core.internal.command.DbMigrate$5.doInTransaction(DbMigrate.java:287)
at
org.flywaydb.core.internal.command.DbMigrate$5.doInTransaction(DbMigrate.java:285)
at
org.flywaydb.core.internal.util.jdbc.TransactionTemplate.execute(TransactionTemplate.java:7
2)
at
org.flywaydb.core.internal.command.DbMigrate.applyMigration(DbMigrate.java:285)
at
org.flywaydb.core.internal.command.DbMigrate.access$800(DbMigrate.java:46)
at
org.flywaydb.core.internal.command.DbMigrate$2.doInTransaction(DbMigrate.java:207)
at
org.flywaydb.core.internal.command.DbMigrate$2.doInTransaction(DbMigrate.java:156)
at
org.flywaydb.core.internal.util.jdbc.TransactionTemplate.execute(TransactionTemplate.java:7
2)
at
org.flywaydb.core.internal.command.DbMigrate.migrate(DbMigrate.java:156)
at org.flywaydb.core.Flyway$1.execute(Flyway.java:864)
at org.flywaydb.core.Flyway$1.execute(Flyway.java:811)
at org.flywaydb.core.Flyway.execute(Flyway.java:1171)
at org.flywaydb.core.Flyway.migrate(Flyway.java:811)
at
org.dspace.storage.rdbms.DatabaseUtils.updateDatabase(DatabaseUtils.java:419)
... 13 more
Caused by: org.postgresql.util.PSQLException: ERROR: constraint
"metadatavalue_item_id_fkey" of relati
on "metadatavalue" does not exist
at
org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse(QueryExecutorImpl.java:2103)
at
org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImpl.java:1836)
at
org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:257)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:512)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.executeWithFlags(AbstractJdbc2Statement.java:38
8)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:381)
at
org.apache.commons.dbcp.DelegatingPreparedStatement.execute(DelegatingPreparedStatement.jav
a:172)
at
org.apache.commons.dbcp.DelegatingPreparedStatement.execute(DelegatingPreparedStatement.jav
a:172)
at
org.apache.commons.dbcp.DelegatingPreparedStatement.execute(DelegatingPreparedStatement.jav
a:172)
at
org.dspace.storage.rdbms.MigrationUtils.dropDBConstraint(MigrationUtils.java:106)
at
org.dspace.storage.rdbms.migration.V5_0_2014_09_25__DS_1582_Metadata_For_All_Objects_drop_c
onstraint.migrate(V5_0_2014_09_25__DS_1582_Metadata_For_All_Objects_drop_constraint.java:61)
at
org.flywaydb.core.internal.resolver.jdbc.JdbcMigrationExecutor.execute(JdbcMigrationExecuto
r.java:45)
... 27 more
Thanks
Keith
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