Dear Vuong, how did you come up with that procedure? It doesn’t say so in the course material. As pointed out before this won’t work.
I would recommend you to start in a fresh directory and follow _carefully_ the installation instructions and the getting started guide on the website (https://dumux.org/gettingstarted/ <https://dumux.org/gettingstarted/>). This shows you how to configure and build dumux and run your first application. As for your question, the build directories are created by CMake when you run dunecontrol inside each module folder (dune-common/build-cmake, dumux/build-cmake, …) (but please just follow the instructions, it is described there). If you encounter problems with the procedure let us know. Best regards Timo > On 30. Nov 2021, at 20:40, Pham, Vuong Van <vuongvanp...@ku.edu> wrote: > > Dear all, > Thanks for pointing that out, and so that is the issue I want to address. My > point is, I read the DuMuX course tutorial and came up with this procedure, > as follows (in order to use DuMuX): > > Install DUNE and DuMuX -> build the source files (i.e., > CMakeLists.txt; problem.hh, params.input, etc) -> cmake CMakeLists.txt -> > execute DuMuX as ./…. params.input > > Therefore, please assist me on the mistakes in my understanding above > (especially the meaning, use, and how-to-create such the _build_ directory, > or build-cmake) > > I really appreciate your support. I am a beginner in DuMuX so I hope that my > questions are not that dumb. > > Best regards, > Vuong Van Pham > Graduate Research Assistant (GRA) > Department of Chemical and Petroleum Engineering (CPE), University of Kansas > Email: vuongvanp...@ku.edu <mailto:vuongvanp...@ku.edu> > Phone: +1-(785)-979-2664 > > > > From: Pham, Vuong Van > Sent: Thursday, November 18, 2021 5:02 PM > To: Timo Koch <koch_t...@hotmail.com <mailto:koch_t...@hotmail.com>>; DuMux > User Mailing List <dumux@listserv.uni-stuttgart.de > <mailto:dumux@listserv.uni-stuttgart.de>> > Subject: RE: [DuMux] (no subject) > > Dear all, > Thanks for pointing that out, and so that is the issue I want to address. My > point is, I read the DuMuX course tutorial and came up with this procedure, > as follows (in order to use DuMuX): > > Install DUNE and DuMuX -> build the source files (i.e., > CMakeLists.txt; problem.hh, params.input, etc) -> cmake CMakeLists.txt -> > execute DuMuX as ./…. params.input > > Therefore, please assist me on the mistakes in my understanding above > (especially the meaning, use, and how-to-create such the _build_ directory, > or build-cmake) > > I really appreciate your support. I am a beginner in DuMuX so I hope that my > questions are not that dumb. > Best regards, > Vuong Van Pham > Graduate Research Assistant (GRA) > Department of Chemical and Petroleum Engineering (CPE), University of Kansas > Email: vuongvanp...@ku.edu <mailto:vuongvanp...@ku.edu> > Phone: +1-(785)-979-2664 > > > > From: Timo Koch <koch_t...@hotmail.com <mailto:koch_t...@hotmail.com>> > Sent: Thursday, November 18, 2021 4:30 AM > To: DuMux User Mailing List <dumux@listserv.uni-stuttgart.de > <mailto:dumux@listserv.uni-stuttgart.de>> > Cc: Pham, Vuong Van <vuongvanp...@ku.edu <mailto:vuongvanp...@ku.edu>> > Subject: Re: [DuMux] (no subject) > > Dear Vuong, > > it looks like you ran cmake in the source directory. You have to run „make > executable“ in the _build_ directory. Per default dumux/build-cmake/… > > Timo > > > 18. nov. 2021 kl. 08:19 skrev Kilian Weishaupt > <kilian.weisha...@iws.uni-stuttgart.de > <mailto:kilian.weisha...@iws.uni-stuttgart.de>>: > > > Dear Vuong Van, > > did you modify anything in your CMakeLists.txt file? You said the test ran > successfully so the executable in > dumux/dumux/build-cmake/test/porousmediumflow/1p" was build successfully? > > Best wishes > Kilian > > On 18.11.21 07:53, Pham, Vuong Van wrote: > Dear Kilian, > Still following the Cmake command (i.e., make name_of_executable), I > attempted to do so in the Ubuntu command window, however I received this > error as attached: > <image001.png> > The picture indicated that for some reasons the command > “dune_symlink_to_source_files” is unknown to Cmake. Besides, what I observed > was that, the commands that are relevant to DUNE, somehow are unknown by > Cmake and cause incomplete configuration. Please assist me on this error. > > Best regards, > Vuong Van Pham > Graduate Research Assistant (GRA) > Department of Chemical and Petroleum Engineering (CPE), University of Kansas > Email: vuongvanp...@ku.edu <mailto:vuongvanp...@ku.edu> > Phone: +1-(785)-979-2664 > > > > > From: Kilian Weishaupt <kilian.weisha...@iws.uni-stuttgart.de> > <mailto:kilian.weisha...@iws.uni-stuttgart.de> > Sent: Thursday, November 18, 2021 12:42 AM > To: Pham, Vuong Van <vuongvanp...@ku.edu> <mailto:vuongvanp...@ku.edu> > Cc: DuMux User Mailing List <dumux@listserv.uni-stuttgart.de> > <mailto:dumux@listserv.uni-stuttgart.de> > Subject: Re: [DuMux] (no subject) > > Dear Vuong Van, > > I'm glad the installation worked now. > > 1.) > > CMakeLists.txt is a configuration file read by CMake, a build system > generator. If configured correctly, > you compile your source code just by calling > > make name_of_the_executable > > If you make any changes to CMakeLists.txt, a simple > > make > > will update the build configuration. > > Have a look at the tests or at our course exercises here > https://git.iws.uni-stuttgart.de/dumux-repositories/dumux-course/-/tree/master/exercises/exercise-basic > > <https://nam10.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgit.iws.uni-stuttgart.de%2Fdumux-repositories%2Fdumux-course%2F-%2Ftree%2Fmaster%2Fexercises%2Fexercise-basic&data=04%7C01%7Cvuongvanpham%40ku.edu%7Cde613490bee44b1296d908d9aa7e63c5%7C3c176536afe643f5b96636feabbe3c1a%7C0%7C0%7C637728282092917187%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=zdHLOvKbHWQHW7G17zW1GN1%2Bq5Vj%2FajNuTGk0LVx8F4%3D&reserved=0> > to get more information > on how to properly use CMakeLists.txt > > 2.) You may either just use a simple text editor such as Atom or notepad++ or > you can try setting up VS Code (an IDE) which however, is a little bit more > involved to configure. Note that you can either edit your files under Windows > (as shown in the windows explorer) or using the Ubuntu subsytem. Whatever > works better for you. > > See Point 3 in our wiki on how to get VS Code > https://git.iws.uni-stuttgart.de/dumux-repositories/dumux/-/wikis/Windows-Subsystem-for-DuMux > > <https://nam10.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgit.iws.uni-stuttgart.de%2Fdumux-repositories%2Fdumux%2F-%2Fwikis%2FWindows-Subsystem-for-DuMux&data=04%7C01%7Cvuongvanpham%40ku.edu%7Cde613490bee44b1296d908d9aa7e63c5%7C3c176536afe643f5b96636feabbe3c1a%7C0%7C0%7C637728282092927180%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=gLWMDVj2UyWQPUESnsfD2QvorfIAifDLjJefjt%2BTzX0%3D&reserved=0> > > > PS: Please always respond to the mailing list > (dumux@listserv.uni-stuttgart.de <mailto:dumux@listserv.uni-stuttgart.de>, I > also forgot to do that in my first mail) such that others can profit from our > discussion, too. > > Best wishes > Kilian > > On 17.11.21 20:56, Pham, Vuong Van wrote: > Dear Kilian, > I am glad to receive your swift response. Following the use of DuMuX (at this > point I installed all folders and ran the test successfully), I have the > concerns listed as below: > 1. The core structure of a “DuMux” job contains files as the attached > figure. I believe that I have to compile the “CMakeLists.txt” using CMake > prior to any further execution. May you assist me how to compile such that > “CMakeLists.txt” properly? > <image002.png> > 2. By far, I only know how to modify contents in a file (within Ubuntu > subsystem) using Vim editor. However, I may need either Python/C++ later to > modify such files. May you suggest me an IDE to use with C++ in Ubuntu > subsystem? > > I hope that my concerns are appropriate. > > Best regards, > Vuong Van Pham > Graduate Research Assistant (GRA) > Department of Chemical and Petroleum Engineering (CPE), University of Kansas > Email: vuongvanp...@ku.edu <mailto:vuongvanp...@ku.edu> > Phone: +1-(785)-979-2664 > > > > From: Kilian Weishaupt <kilian.weisha...@iws.uni-stuttgart.de> > <mailto:kilian.weisha...@iws.uni-stuttgart.de> > Sent: Wednesday, November 17, 2021 10:28 AM > To: Pham, Vuong Van <vuongvanp...@ku.edu> <mailto:vuongvanp...@ku.edu> > Subject: Re: [DuMux] (no subject) > > Dear Vuong Van, > > we recently updated our wiki for installing Dumux under Windows 10. > > There seems to be an issue with git clone which can be fixed as described in > the wiki. > > https://git.iws.uni-stuttgart.de/dumux-repositories/dumux/-/wikis/Windows-Subsystem-for-DuMux > > <https://nam10.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgit.iws.uni-stuttgart.de%2Fdumux-repositories%2Fdumux%2F-%2Fwikis%2FWindows-Subsystem-for-DuMux&data=04%7C01%7Cvuongvanpham%40ku.edu%7Cde613490bee44b1296d908d9aa7e63c5%7C3c176536afe643f5b96636feabbe3c1a%7C0%7C0%7C637728282092927180%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=gLWMDVj2UyWQPUESnsfD2QvorfIAifDLjJefjt%2BTzX0%3D&reserved=0> > Best wishes > Kilian > > On 12.11.21 01:39, Pham, Vuong Van wrote: > To the DuMux development team, > > My name is VUONG VAN PHAM and I am an interested DuMux user for my research > purpose. When I was tempted to install the simulator using installdumux.py, > the installation was paused and the .log file is attached. > > Please assist me on how to install DuMux correctly. Also please note that I > was tempted to install in ubuntu subsystem within Windows 10 (I do not know > whether that impacts the installation process, however, I inform that fact > just in case). > > Best regards, > Vuong Van Pham > Graduate Research Assistant (GRA) > Department of Chemical and Petroleum Engineering (CPE), University of Kansas > Email: vuongvanp...@ku.edu <mailto:vuongvanp...@ku.edu> > Phone: +1-(785)-979-2664 > > > > > > _______________________________________________ > DuMux mailing list > DuMux@listserv.uni-stuttgart.de <mailto:DuMux@listserv.uni-stuttgart.de> > https://listserv.uni-stuttgart.de/mailman/listinfo/dumux > <https://nam10.safelinks.protection.outlook.com/?url=https%3A%2F%2Flistserv.uni-stuttgart.de%2Fmailman%2Flistinfo%2Fdumux&data=04%7C01%7Cvuongvanpham%40ku.edu%7Cde613490bee44b1296d908d9aa7e63c5%7C3c176536afe643f5b96636feabbe3c1a%7C0%7C0%7C637728282092937174%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=whr9VH%2FhoPCO4bBa8mK5NALr3QDCh7P%2B92nFwyUki2U%3D&reserved=0> > -- > %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% > Kilian Weishaupt > Institut für Wasser- und Umweltsystemmodellierung (IWS) > Lehrstuhl für Hydromechanik und Hydrosystemmodellierung > Universität Stuttgart, Pfaffenwaldring 61, 70569 Stuttgart > Email: kilian.weisha...@iws.uni-stuttgart.de > <mailto:kilian.weisha...@iws.uni-stuttgart.de> > Telefon: 0049 711 685-60461 ** fax: 0049-711-685-60430 > http://www.hydrosys.uni-stuttgart.de > <https://nam10.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.hydrosys.uni-stuttgart.de%2F&data=04%7C01%7Cvuongvanpham%40ku.edu%7Cde613490bee44b1296d908d9aa7e63c5%7C3c176536afe643f5b96636feabbe3c1a%7C0%7C0%7C637728282092947175%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=dbZlT866YezZ%2BYsOA6y3kJOJhPOItupRjINH5LHHPvI%3D&reserved=0> > %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% > -- > %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% > Kilian Weishaupt > Institut für Wasser- und Umweltsystemmodellierung (IWS) > Lehrstuhl für Hydromechanik und Hydrosystemmodellierung > Universität Stuttgart, Pfaffenwaldring 61, 70569 Stuttgart > Email: kilian.weisha...@iws.uni-stuttgart.de > <mailto:kilian.weisha...@iws.uni-stuttgart.de> > Telefon: 0049 711 685-60461 ** fax: 0049-711-685-60430 > http://www.hydrosys.uni-stuttgart.de > <https://nam10.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.hydrosys.uni-stuttgart.de%2F&data=04%7C01%7Cvuongvanpham%40ku.edu%7Cde613490bee44b1296d908d9aa7e63c5%7C3c176536afe643f5b96636feabbe3c1a%7C0%7C0%7C637728282092947175%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=dbZlT866YezZ%2BYsOA6y3kJOJhPOItupRjINH5LHHPvI%3D&reserved=0> > %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% > -- > %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% > Kilian Weishaupt > Institut für Wasser- und Umweltsystemmodellierung (IWS) > Lehrstuhl für Hydromechanik und Hydrosystemmodellierung > Universität Stuttgart, Pfaffenwaldring 61, 70569 Stuttgart > Email: kilian.weisha...@iws.uni-stuttgart.de > <mailto:kilian.weisha...@iws.uni-stuttgart.de> > Telefon: 0049 711 685-60461 ** fax: 0049-711-685-60430 > http://www.hydrosys.uni-stuttgart.de > <https://nam10.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.hydrosys.uni-stuttgart.de%2F&data=04%7C01%7Cvuongvanpham%40ku.edu%7Cde613490bee44b1296d908d9aa7e63c5%7C3c176536afe643f5b96636feabbe3c1a%7C0%7C0%7C637728282092957170%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=QBDlHB8UdqRmhnwyAA%2FRwkrR%2FQy4zEYz8vX8WW6ycoU%3D&reserved=0> > %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% > _______________________________________________ > DuMux mailing list > DuMux@listserv.uni-stuttgart.de <mailto:DuMux@listserv.uni-stuttgart.de> > https://listserv.uni-stuttgart.de/mailman/listinfo/dumux > <https://listserv.uni-stuttgart.de/mailman/listinfo/dumux>
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