Multiple PhD Positions in Ecological Genomics beginning Spring 2019

As part of a new, collaborative NSF-funded research and training program in the 
genomic ecology of 
coastal organisms, the Universities of Maine and New Hampshire seek a cohort of 
up to five new PhD 
students who will study genome-phenome relationships in the wild. All students 
will conduct both field 
work and genomic analyses towards understanding adaptation and fitness 
associations in several 
species of tidal marsh sparrows (see further details below).  Field work during 
summer months may 
involve supervising field crews in tidal marshes across the Northeast US, from 
Maine to Virginia.  
Genomic analyses may include whole-genome sequencing, candidate gene 
sequencing, gene 
expression analyses, meta-barcoding, and microbiome characterization. All 
students will have the 
opportunity to work in collaboration with a diverse team of investigators, 
graduate students, and 
undergraduate students at both institutions.  

Two students will be based primarily at the University of Maine-- Orono, an 
hour to the ocean and an 
hour and a half to Maine’s highest peak.

1. Ecological genomics of sparrow plumage: One PhD student will be co-advised 
by Drs. Kristina 
Cammen (http://cammenlab.org) and Brian Olsen (https://sbe.umaine.edu/olsen-2/) 
through the Ecology 
and Environmental Sciences program at the University of Maine. This student 
will investigate adaptation 
and the links between plumage phenotypes (color, resilience to wear, and 
microbiomes) and 
reproductive fitness across sparrow species. For more information, or to apply, 
please contact: 
kristina.cam...@maine.edu and brian.ol...@maine.edu

2. Ecological genomics of kidney function: One PhD student will be advised by 
Dr. Benjamin King 
(https://umaine.edu/biomed/home/faculty/benjamin-king/) through the Molecular 
and Biomedical 
Sciences program at the University of Maine. The student will research genes 
and pathways under 
selection in tidal marsh sparrow species with greater salinity tolerance using 
comparative genomics, 
population genomics and transcriptomics. For more information, or to apply, 
please contact: 
benjamin.l.k...@maine.edu.

Three students will be based primarily at the University of New Hampshire in 
Durham, NH, 30 minutes 
from the ocean and less than two hours from the White Mountains. Students will 
be enrolled in the 
Natural Resources and Earth Systems Science (NRESS) program  
(https://www.unh.edu/nressphd) and 
will be advised by Dr. Adrienne Kovach (http://www.kovachlab.com). Students 
will conduct research in 
the following three focus areas: 1) Genetic underpinnings of nesting 
adaptations and links between 
nesting traits, including the timing of nest initiation, candidate genes for 
circadian rhythms, and 
reproductive fitness across sparrow species; 2) Parallel evolution – this 
student will investigate 
broadscale genotype-phenotype and genotype-environment relationships in 
relation to tidal marsh 
adaptations for six sparrow species sampled across an environmental and 
geographic gradient; and 3) 
Diet and eco-evolutionary feedbacks – this student will study variation in 
sparrow diets using meta-
barcoding of fecal samples and the linkages with fitness and the trophic 
impacts on the marsh; this 
student will also work closely with Drs. Serita Frey (UNH) and Mike Kinnison 
(UMaine). To apply, or for 
more information, contact adrienne.kov...@unh.edu. 

Qualifications: Successful candidates must have a strong background in ecology 
and/or genomics. 
Preferred candidates will have demonstrated experience with field work, in 
particular, bird mist-netting 
(previous time as a federal banding sub-permittee strongly preferred), as well 
as experience in genetics, 
genomics, and/or bioinformatics. Consistent with our program scope and to 
advance an integrated 
understanding of adaptation in nature, we are especially interested in 
candidates who show promise to 
work in an inclusive and diverse collaborative environment and to engage 
intellectually across the 
diverse scales of genomes, phenomes, and environmental feedbacks. Individuals 
who are intellectually 
curious, responsible, willing to learn, team-oriented, and have attention to 
detail are encouraged to 
apply. An M.S. in a related field is preferred, but qualified candidates with 
extensive experience will be 
considered.  

How to apply: Please send a cover letter describing your qualifications, 
including your commitment to 
diversity and inclusion in collaborative science, a curriculum vitae, 
unofficial transcripts, and the contact 
information for at least three references to the contacts listed above for each 
position for which you 
would like to be considered. Please use “Ecological Genomics PhD Student 
Search” as the subject line 
of your email. All applications received before November 14, 2018 will receive 
full consideration, and 
applications will be accepted on a rolling basis thereafter until the positions 
are filled. A start date of 
January 2019 is strongly preferred, but is negotiable depending on the position 
in question. 

The Universities of Maine and New Hampshire Systems are both EEO/AA employers, 
and do not 
discriminate on the grounds of race, color, religion, sex, sexual orientation, 
including transgender status 
and gender expression, national origin, citizenship status, age, disability, 
genetic information or 
veteran’s status in employment, education, and all other programs and 
activities. Please contact the 
Director of Equal Opportunity, 101 N. Stevens Hall, Orono, ME 04469 at 
207-581-1226 (voice), TTY 711 
(Maine Relay System), or equal.opportun...@maine.edu, or the Affirmative Action 
and Equity Office, 
Thompson Hall 305, 105 Main Street, Durham, NH 03824-3547 at 603-862-2930 
(voice), TTY: (603) 
862-1527 • Relay NH: 7-1-1, or affirmaction.equ...@unh.edu with questions or 
concerns.

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