Hello Nicolas,
it's really strange.
I've checked it another time some minutes ago and, on my machine, this
works.
I've used the following command to do the test :
for emacs 25.3
#+begin_src sh
emacs -Q -L lisp -L ~/.emacs.d/elpa-25/htmlize-20180412.1244 -l 
~/.emacs.d/elpa-25/htmlize-20180412.1244/htmlize-autoloads.el 
testing/examples/test.org
#+end_src

for Emacs 26.1 (934bb475b9)
#+begin_src sh
emacs -Q -L lisp -L ~/.emacs.d/elpa-25/htmlize-20180412.1244 -l 
~/.emacs.d/elpa-25/htmlize-20180412.1244/htmlize-autoloads.el 
testing/examples/test.org
#+end_src

And I still obtain the expected results : see the text attached file
(encoded in utf-8-unix).
                                                    
                     TEST WITH DIFFERENT ENCODINGS.

                           Pierre TÚchoueyres
                                                    


Table of Contents
                 

1. Pierre TÚchoueyres





1 Pierre TÚchoueyres
                    

  bad
       
    @echo off
    
    echo Hello Pierre T┌choueyres ±
    
    rem Local Variables:
    rem coding: cp850-dos
    rem mode: bat
    rem End:
       
  or (only without
  0001-Manage-correctly-the-encoding-of-files-with-include-.patch
  applied)
       
    #!/bin/sh # -*- coding: iso-8859-15-unix -*-
    
    echo "Hello Pierre TÚchoueyres"
    
    # Local Variables:
    # coding: iso-8859-15-unix
    # End:
       

  and good ?
       
    @echo off
    
    echo Hello Pierre TÚchoueyres  
    
    rem Local Variables:
    rem coding: cp850-dos
    rem mode: bat
    rem End:
       
  or
       
    #!/bin/sh # -*- coding: iso-8859-15-unix -*-
    
    echo "Hello Pierre TÚchoueyres"
    
    # Local Variables:
    # coding: iso-8859-15-unix
    # End:
       

       
    Org mode version 9.1.13 (release_9.1.13-763-gcd25c7 @ 
/home/ptechoueyres/Travail/VCS/emacs-org-mode/lisp/)
       
So I don't really understand what's appening.

Nicolas Goaziou <m...@nicolasgoaziou.fr> writes:

> Hello,
>
> pierre.techouey...@free.fr (Pierre Téchoueyres) writes:
>
>> I reattach the examples, but note that  the cmd.txt or sh.txt extensions
>> are only there to avoid my mail to be wiped out.
>
> I must be missing something. When I install both patches, and I export
> your example to, e.g., UTF-8, I get the following document, where coding
> systems are not resolved.
>
> 1 Pierre Téchoueyres
> ════════════════════
>
>   bad
>   ┌────
>   │ @echo off
>   │ 
>   │ echo Hello Pierre T├Üchoueyres ├▒
>   │ 
>   │ rem Local Variables:
>   │ rem coding: cp850-dos
>   │ rem mode: bat
>   │ rem End:
>   └────
>   or
>   ┌────
>   │ #!/bin/sh # -*- coding: iso-8859-15-unix -*-
>   │ 
>   │ echo "Hello Pierre Téchoueyres"
>   │ 
>   │ # Local Variables:
>   │ # coding: iso-8859-15-unix
>   │ # End:
>   └────
>
>   and good ?
>   ┌────
>   │ @echo off
>   │ 
>   │ echo Hello Pierre TÚchoueyres ñ
>   │ 
>   │ rem Local Variables:
>   │ rem coding: cp850-dos
>   │ rem mode: bat
>   │ rem End:
>   └────
>   or
>   ┌────
>   │ #!/bin/sh # -*- coding: iso-8859-15-unix -*-
>   │ 
>   │ echo "Hello Pierre Téchoueyres"
>   │ 
>   │ # Local Variables:
>   │ # coding: iso-8859-15-unix
>   │ # End:
>   └────
>
> Regards,

-- 
| Pierre Téchoueyres -  Appt. 150 Bat. B
| Tel : 05 56 42 53 22  Res. Le FLORE              ___
|       09 51 40 74 43  32 rue Marcelin Berthelot  ,,,
| Port: 06 77 11 64 05  33200 CAUDERAN            (o o)
| mailto:pierre.techouey...@free.fr         ---ooO-(_)-Ooo---

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