Interesting 2013 paper. I didn't get from the paper whether the authors 
concluded that this coding is constituted from an emergent feature of the 
cosmos, given the right conditions? Is it a feature of embedded an emergent 
program, based on physics that acts on the chemicals, panspermia, Ufo's, God? 
(you know He doesn't like to be called that! -BG2)
Unanswerables....


-----Original Message-----
From: Evgenii Rudnyi <use...@rudnyi.ru>
To: everything-list@googlegroups.com
Sent: Tue, Jan 19, 2021 12:01 pm
Subject: Re: Evolution 2.0 Prize - $10 million

I do not know if you have seen this paper:

Molecular Codes in Biological and Chemical Reaction Networks
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0054694

They claim that in random chemical networks one can find some semantic:

"High semantic capacity was found in the studied biochemical systems and 
in random reaction networks where the number of second order reactions 
is twice the number of species."

I guess that they should apply for the prize.

Evgeny

Am 19.01.2021 um 00:58 schrieb smitra:
> On 18-01-2021 18:03, Evgenii Rudnyi wrote:
>> Am 18.01.2021 um 01:01 schrieb Lawrence Crowell:
>>> There are molecules that already do this. DNA and polypeptides are
>>> sequences that are in effect codes.
>>
>> Yes, this is exactly the point by the prize. The question is to show
>> how something like this could happen spontaneously.
>>
>> Evgeny
>>
> 
> It requires violating local thermodynamic equilibrium. I'm working on an 
> article and a few presentations for upcoming conferences where I explain 
> this in detail. This then proves that none of the current models for 
> prebiotic chemistry can explain the origin of life. A viable scenario is 
> to get to a large random organic structure forged in an interstellar ice 
> grain, where organic molecules at low temperatures under UV irradiation 
> will only interact with nearest neighbors. Thermodynamic equilibrium is 
> never reached, the system moves farther and farther away from this as 
> the reactions under UV radiation continue. This way one gets to large 
> so-called percolation clusters of organic molecules that have a random 
> structure.
> 
> Such random organic structures look totally useless to explain the 
> origin of life, because what you want are the very specific molecules 
> that are involved in the biochemical processes in living organisms. 
> However, the structure of these random organic molecules is such that it 
> has interior structures with compartments containing large random 
> polymers and random interior surface structures. These can then serve as 
> micro-environments within which prebiotic chemistry under normal local 
> thermodynamic equilibrium conditions can work. With a finite number of N 
> structures in a compartment one will break symmetries such as chiral 
> symmetry at a level of 1/sqrt(N). Small molecules can escape the 
> compartments via pores in the random structure while large molecules get 
> trapped inside.
> 
> Saibal
> 
> 
>>
>>> LC
>>>
>>> On Monday, January 4, 2021 at 12:28:18 PM UTC-6 use...@rudnyi.ru wrote:
>>>
>>>> "How do you get from chemicals to code? How do you get a code without
>>>> designing one?"
>>>>
>>>> "What You Must Do to Win The Prize
>>>>
>>>> You must arrange for a digital communication system to emerge or
>>>> self-evolve without "cheating." The diagram below describes the system.
>>>> Without explicitly designing the system, your experiment must generate
>>>> an encoder that sends digital code to a decoder. Your system needs to
>>>> transmit at least five bits of information. (In other words it has 
>>>> to be
>>>> able to represent 32 states. The genetic code supports 64.) "
>>>>
>>>> https://www.herox.com/evolution2.0
>>>>
>>>
> 

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