Hi Yan,

mri_convert should be able to convert back and forth, just based on extension.

mri_convert brain.mgz brain.img
and

mri_convert brain.img brain.mgz

should both work. Try loading the .img in tkmedit and see if it displays properly

cheers,
Bruce

On Wed, 1 Mar 2006, yanxia wrote:

Dear All,

I am a new user of FreeSurfer. I have two questions:

1> Is there a way to convert FreeSurfer surface files to Analyze format? I use 'tkmedit bert brain.mgz lh.pial' to view the image with the surface bounday, and hope that I can save the image and the surface boundary with Analyze format.

2> mri_convert can be use to convert *.mgz file to Analyze file. I use "mri_convert brain.mgz brain.img"> It is empty when I try to open "brain.img" with MRICON software.

Thank you so sume.

Best Regards,
Yan


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