how much RAM do you have on the machine that it's running on? What was the exit code of the process? On Mon, 12 Jul 2010 [email protected] wrote:
> > the recon-all.log does not show anything missing, however it is apparent > now that it definitly didn't finish. For most of my subjects it stopped > running at: > > Left_Cerebellum_Cortex (8): linear fit = 1.08 x + 0.0 (26249 voxels, > overlap=0.958) > Left_Cerebellum_Cortex (8): linear fit = 1.08 x + 0.0 (26249 voxels, peak = > 64), gca=64.5 > gca peak = 0.12723 (61) > mri peak = 0.03761 (63) > Right_Cerebellum_Cortex (47): linear fit = 1.02 x + 0.0 (27939 voxels, > overlap=0.963) > Right_Cerebellum_Cortex (47): linear fit = 1.02 x + 0.0 (27939 voxels, peak > = 63), gca=62.5 > gca peak = 0.22684 (88) > mri peak = 0.10929 (95) > Left_Cerebellum_White_Matter (7): linear fit = 1.08 x + 0.0 (8347 voxels, > overlap=0.476) > Left_Cerebellum_White_Matter (7): linear fit = 1.08 x + 0.0 (8347 voxels, > peak = 95), gca=94.6 > gca peak = 0.21067 (87) > mri peak = 0.11382 (93) > Right_Cerebellum_White_Matter (46): linear fit = 1.08 x + 0.0 (7525 voxels, > overlap=0.506) > Right_Cerebellum_White_Matter (46): linear fit = 1.08 x + 0.0 (7525 voxels, > peak = 94), gca=93.5 ****STOPPED RUNNING HERE ******* > > if anyone can recognize this step so I don't have to run full recon again > that would be great or any ideas as to why this happend > > best, > > Anson K. > > University of Michigan > > On Mon, 12 Jul 2010 11:39:10 -0400 (EDT), Allison Stevens > <[email protected]> wrote: >> What does the recon-all.log file in the stats dir show for the steps it >> missed? >> Allison > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
