Can you send the recon-all.log file? Zhangyuanchao wrote: > Dear expert， > We compute the MRI data with FREESURFER using > instruction recon-all -s < > -all,but some data will show recon > -all exited with ERRORS in the recon-all-status.log. The flowing > display error information : > status file for recon-all > Thu Nov 11 19:22:13 HKT 2010 > recon-all finished without error at Thu Nov 11 19:22:17 HKT 2010 > > > > New invocation of recon-all > > > > status file for recon-all > Thu Nov 11 20:26:17 HKT 2010 > #...@# MotionCor Thu Nov 11 20:26:17 HKT 2010 > #...@# Nu Intensity Correction Thu Nov 11 20:26:33 HKT 2010 > #...@# Talairach Thu Nov 11 20:26:57 HKT 2010 > #...@# Talairach Failure Detection Thu Nov 11 20:27:50 HKT 2010 > #...@# Intensity Normalization Thu Nov 11 20:27:50 HKT 2010 > #...@# Skull Stripping Thu Nov 11 20:31:17 HKT 2010 > Linux ccm.web 2.6.18-194.17.1.el5xen #1 SMP Wed Sep 29 13:30:21 EDT > 2010 x86_64 x86_64 x86_64 GNU/Linux > > recon-all exited with ERRORS at Thu Nov 11 23:17:40 HKT 2010 > > OR > > LIKE THIS: > > > status file for recon-all > Thu Nov 11 19:33:11 HKT 2010 > recon-all finished without error at Thu Nov 11 19:33:15 HKT 2010 > > > > New invocation of recon-all > > > > status file for recon-all > Mon Nov 22 00:51:21 HKT 2010 > #...@# MotionCor Mon Nov 22 00:51:21 HKT 2010 > #...@# Nu Intensity Correction Mon Nov 22 00:51:37 HKT 2010 > #...@# Talairach Mon Nov 22 00:52:34 HKT 2010 > #...@# Talairach Failure Detection Mon Nov 22 00:53:20 HKT 2010 > #...@# Intensity Normalization Mon Nov 22 00:53:20 HKT 2010 > #...@# Skull Stripping Mon Nov 22 00:56:37 HKT 2010 > #...@# EM Registration Mon Nov 22 02:36:07 HKT 2010 > #...@# CA Normalize Mon Nov 22 03:17:48 HKT 2010 > #...@# CA Reg Mon Nov 22 03:20:05 HKT 2010 > #...@# CA Reg Inv Mon Nov 22 07:03:03 HKT 2010 > #...@# Remove Neck Mon Nov 22 07:04:31 HKT 2010 > #...@# SkullLTA Mon Nov 22 07:06:08 HKT 2010 > #...@# SubCort Seg Mon Nov 22 08:12:28 HKT 2010 > Linux ccm.web 2.6.18-194.17.1.el5xen #1 SMP Wed Sep 29 13:30:21 EDT > 2010 x86_64 x86_64 x86_64 GNU/Linux > > recon-all exited with ERRORS at Mon Nov 22 08:35:10 HKT 2010 > * > * > Could you explain to me the reason for the problem and could you solve > me the problem? I will appreciate your help very much. > Best regards, > Liang Gao > > > > > ------------------------------------------------------------------------ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
