Dear FS team,
I am trying to find what is the connection between white matter tracts with reduced FA and a number of cortical regions/clusters with significant reduction in cortical thickness from QDEC. Is there a way to overlap my cortical regions with reduced thickness more exactly the clusters from QDEC on the connectivity maps in FSL. How I create a mask of the QDEC clusters and used them in tractography? The tractography/ connectivity maps has been performed on the MNI standard space. Any suggestion will be greatly appreciated. Antonella
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