Not sure.
Maybe try the updated scripts
From
http://martinos.org/~mreuter/long/
Best Martin
Alexandru Hanganu <al.hang...@yahoo.ca> wrote:
>Dear Freesurfer Experts,
>
>While performing the long_mris_slopes cmd, we receive an error:
>
>-------------------------------------------
>SUBJECT pls_pd_base00 Running Within-Subject GLM
>
>Writing ./tmp-pls_pd_base00_lh_thickness_Rx7HLs/X-long.mat ...
>
>mri_glmfit --y
>/Applications/freesurfer/subjects/pls_pd_base00/surf/lh.long.thickness-stack.mgh
>
>--X ./tmp-pls_pd_base00_lh_thickness_Rx7HLs/X-long.mat --allow-zero-dof
>
> --no-contrasts-ok --surf pls_pd_base00 lh --label
>/Applications/freesurfer/subjects/pls_pd_base00/label/lh.long.cortex.label
>
>--glmdir ./tmp-pls_pd_base00_lh_thickness_Rx7HLs/glm
>
>Traceback (most recent call last):
> File "/Applications/freesurfer/bin/long_mris_slopes", line 732, in
><module>
> run_cmd(cmd,'mri_glmfit did not work?')
> File "/Applications/freesurfer/bin/long_mris_slopes", line 422, in
>run_cmd
> retcode = subprocess.call(args)
> File
>"/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/subprocess.py",
>
>line 443, in call
> return Popen(*popenargs, **kwargs).wait()
> File
>"/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/subprocess.py",
>
>line 593, in __init__
> errread, errwrite)
> File
>"/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/subprocess.py",
>
>line 1079, in _execute_child
> raise child_exception
>OSError: [Errno 8] Exec format error
>-------------------------------------------
>
>we changed the mris_calc and mri_glmfit files with the new ones (8.2MB
>/
>15.8MB).
>
>Can you please help with this ?
>
>Thank you in advance,
>
>Sincerely,
>Alex.
>
>_______________________________________________
>Freesurfer mailing list
>Freesurfer@nmr.mgh.harvard.edu
>https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
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