Hi list,
I'm running trac-all -path -c $FREESURFER/dmrirc_single_subject but I have this 
error:
Loading mask from 
/Applications/freesurfer/subjects/subject_prova/Con02/dlabel/diff/aparc+aseg_mask.bbr.nii.gzLoading
 BEDPOST parameter samples from 
/Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostXniiRead(): 
error opening file 
/Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX/merged_ph1samples.nii.gzERROR:
 Could not read 
/Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX/merged_ph1samples.nii.gz
>From http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg22066.html 
>I'm deducing that the error may be related trace-all upload.
I have doing this upload but I visualize always the same error.
I attached tract-all uploades file that live in /Applications/freesurfer/bin.
Please, could you check it?
I have also other question. May I run the second step of trac-all (bedpostx) 
using FSL on other pc? In this way, could I directly run in FSL dmri folder? Do 
you think that I should rename some files?
Thanks,

Stefano 
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to