Hi Doug, I was running the command out of the $SUBJECTS_DIR. I created a log folder in the $SUBJECTS_DIR and then the command ran smoothly! Thanks!
Best, Alex > > Hi Alex, are you running it from the project folder? It is looking for a > folder called "log" in the current directory. It should be creating this > folder (bug). So, if you run it from the project folder, the log folder > will be there. Or can create a log folder in your current directory > (mkdir log) > > doug > > On 7/30/13 2:03 PM, Alexandra Tanner wrote: >> Dear Doug and Freesurfers, >> >> I am attempting to run funcroi-table-sess on a set of subjects but keep >> getting an error message I've never seen before: >> >> funcroi-table-sess -roi >> /cluster/roffman/users/Stable5_PerRun/ROI_Analysis/FB12/ctx.lh.insula.aparc+aseg_2vFix.roicfg >> -sf >> /cluster/roffman/users/Stable5_PerRun/Subject_Files/30_ActiveFolateAndPlacebo_PostPrePAIRED >> -c Cond2vFix -o >> /cluster/roffman/users/Stable5_PerRun/ROI_Analysis/FB12/18ActiveFolate_12Placebo_PreAndPost_7Tpost/ctx_lh_insula_aparc+aseg_2vFix >> >> >> log/funcroi-table-sess.log >> log/funcroi-table-sess.log: No such file or directory. >> >> >> Funcroi-sess ran without error, as did funcroi-config. I've run this >> analysis many times in the past and have never had this problem so I am >> at >> a loss as to what is going wrong. Any help would be greatly appreciated! >> >> Thanks, >> Alex >> >> >> >> > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
