Pablo, I need the recon-all.log file located in the $SUBJECTS_DIR/scripts directory. Sorry for the confusion.
-Zeke On 12/13/2013 04:48 PM, pablo najt wrote: > Dear Zeke, > Thank you so much. As I am not sure which is the log file that we use I > am attaching mri_nu (in mri directory) and talairach_avi (in > mri/transformations directory). > Thanks, > Pablo > > > Date: Fri, 13 Dec 2013 16:21:48 -0500 > > From: zkauf...@nmr.mgh.harvard.edu > > To: pablon...@hotmail.com > > CC: freesurfer@nmr.mgh.harvard.edu > > Subject: Re: [Freesurfer] Output of recon-all -all -openmp 8 does not > show brainmask.mgz > > > > Hello Pablo, > > > > Please send me the recon-all.log file for the subject and I will take a > > look. > > > > -Zeke > > > > On 12/13/2013 03:41 PM, pablo najt wrote: > > > Dear FS, > > > I am checking on the outputs of recon-all -all using the flag > -openmp 8. > > > As I did with standard recon-all -all comand line I was trying to check > > > brainmask.mgz, but there is not such file. Is there anything wrong with > > > my outputs? Or I should be checking a different file? > > > Thank you, > > > Pablo > > > > > > > > > _______________________________________________ > > > Freesurfer mailing list > > > Freesurfer@nmr.mgh.harvard.edu > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > > > The information in this e-mail is intended only for the person to > whom it is > > addressed. If you believe this e-mail was sent to you in error and > the e-mail > > contains patient information, please contact the Partners Compliance > HelpLine at > > http://www.partners.org/complianceline . If the e-mail was sent to > you in error > > but does not contain patient information, please contact the sender > and properly > > dispose of the e-mail. > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
