If you know the vertex you want to extract, then you can run something like
mri_segstats --i y.mgh --crs vertexno 0 0 --avgwf out.dat
where y.mgh is the stack created by qdec and out.dat is the data file
you want
doug
On 8/28/14 8:37 AM, Abrishamchi, Aurash David wrote:
Hello,
I still cannot solve this issue. All help will be appreciated.
I am running Qdec analysis on about 100 subjects and correcting with
FDR. Once I do this I click the "find clusters and go to max" button
and Qdec gives me a plot of all the data as well as taking me to the
max vertex in the #1 cluster.
I want to extract the data from the table so that I can put it in
excel and calculate some correlations however I cannot find a way to
do so without hovering or clicking on each data point and manually
entering the values into excel. As you can imagine this is very
tedious when there are 100 subjects and 12 regions that we are looking
at.
Please let me know if there is an alternative way to export the data
into excel or even to a word processing file so that the values can be
copied and pasted into excel.
Best,
Aurash Abrishamchi
Research Co Op - NCRI - Massachusetts General Hospital
165 Cambridge Street, Suite 600
Boston, MA 02214
P: 617-726-4284
aabrisham...@mgh.harvard.edu
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
