Hello Freesurfers,
I use freesurfer v5.3.0
When I do group analysis correction for multiple comparisons for lh as follows:
mri_glmfit --y ces.nii.gz --wls cesvar.nii.gz --osgm --glmdir group.glm
--nii.gz --surface fsaverage lh
mri_glmfit-sim --glmdir group.glm --cache 3 pos --cwpvalthresh .0166
I get this error message:
ERROR: cannot find
/Applications/freesurfer/average/mult-comp-cor/fsaverage/lh/cortex/fwhm00/pos/th30/mc-z.csd
For the mkanalysis-sess i used fwhm = 5.
When i do the same for mni305 and use:
mri_glmfit --y ces.nii.gz --wls cesvar.nii.gz --osgm --glmdir group.glm
--nii.gz
mri_glmfit-sim --glmdir group.glm --grf 3 pos --cwpvalthresh .0166
It works well without an error.
Thanks,Eiran
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