Thanks Noah. It doea say on the website that you need the 2012b runtime, but its definitely buried among too much other, less critical stuff Cheers E
Juan Eugenio Iglesias Postdoctoral researcher BCBL www.jeiglesias.com www.bcbl.eu Legal disclaimer/Aviso legal/Lege-oharra: www.bcbl.eu/legal-disclaimer ----- Original Message ----- From: Noah Markowitz <noahb.markow...@gmail.com> To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Sent: Sat, 04 Jul 2015 13:57:53 +0200 (CEST) Subject: Re: [Freesurfer] Help with V6 Hey Eugenio, I was able to resolve it with the help of another expert. One of the problems definitely was that 2014b doesn’t run on the hippocampal-subfields module. Maybe try adding that as a note to the website as numerous people have access to the 2014b version and 2015a was just released. Thanks again for all the help. Cheers, Noah > On Jul 3, 2015, at 5:12 PM, Eugenio Iglesias <e.igles...@bcbl.eu> wrote: > > Hi Noah, > this error is pretty weird. Can you please send us the exact command you > executed? > Regarding the runtime: your 2014b runtime won't work. You need to follow the > instructions here: > https://surfer.nmr.mgh.harvard.edu/fswiki/MatlabRuntime > Cheers, > Eugenio > > Juan Eugenio Iglesias > Postdoctoral researcher BCBL > www.jeiglesias.com > www.bcbl.eu > > Legal disclaimer/Aviso legal/Lege-oharra: www.bcbl.eu/legal-disclaimer > > > ----- Original Message ----- > From: "Noah Markowitz" <noahb.markow...@gmail.com> > To: freesurfer@nmr.mgh.harvard.edu > Sent: Friday, July 3, 2015 4:20:02 AM > Subject: [Freesurfer] Help with V6 > > Hi, > > I’m trying to run the ‘beta’ version of FS6, centos4, and encountered the > error: ‘ERROR: Flag -hippocampal-subfields-T1 unrecognized’. I setenv and > source just as described for previous versions. > > Also, I have Matlab 2014b downloaded on the computer (obviously comes with > runtime) but am unsure if the runtime folder needs to be placed in the FS > folder or is fine where it is. > > Any FS experts help with these two problems and concerns? Much appreciated if > you do. > > Cheers, > > Noah Markowitz > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
