Hi FS, MR images of two of my subjects in a group have been acquired with different T1 protocol from the rest. All the subjects has been acquired with sagittal 1mm iso : Width: 230.00 mm (256) Height: 230.00 mm (256) Resolution: 1.113 pixels per mm Pixel size: 0.90x0.90 mm and these two with coronal iso: Width: 220.00 mm (256) Height: 220.00 mm (256) Resolution: 1.164 pixels per mm Pixel size: 0.86x0.86 mm
Now I want to use these images in group analyses with Q-dec. Does Freesurfer Freesurfer automatically reformat/reconstruct the T1 images independent of their acquisition protocol? OR Do I need to reformat the images before running recon-all and then use in the Qdec? If so, which program do you recommend to use? Best regards, Amirhossein Manzouri
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