You have the most recent (i.e. development) version of freeview installed on top of the version 5.3 release of freesurfer.
However, the development version of freeview has diverged to far from its original package, and is no longer compatible with freesurfer version 5.3. If you want to use the development version of freeview, you will need to install the development version of freesurfer, which can be downloaded from this page: ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev/freesurfer-Darwin-lion-dev.tar.gz If you wish to keep the version of freesurfer you already have you may simply install the dev version into an alternate location. For example, $> sudo mkdir /usr/local/freesurfer_dev $> tar -C /usr/local/freesurfer_dev -xzvf freesurfer-Darwin-lion-dev.tar.gz -Zeke On 08/11/2015 08:36 PM, Serdar AKKOL wrote: > Dear Zeke Kaufman, > > I'm sending you this e-mail from Staford University, Laboratory > Behavioral and Cognitive Neurology. We are new in using Freesurfer and > had a problem in "Surface Loading". > > I attached the error message we are getting. We are using the same > version (v 1.379.2.73) on a similar computer without a problem. > > We hope that you would help us about this problem. We are ready to serve > any other information you need. > > Thank you very much. > > Sincerely, > > Serdar Akkol > > Istanbul University > Cerrahpasa Medical Faculty > 4. grade $ freeview -f ./surf/lh.inflated -start_in_debugger Option 'start_in_debugger' not recognized.dyld: lazy symbol binding failed: Symbol not found: ___emutls_get_address Referenced from: /usr/local/freesurfer/Freeview.app/Contents/MacOS/../Frameworks/libstdc++.6.dylib Expected in: /usr/lib/libSystem.B.dylib dyld: Symbol not found: ___emutls_get_address Referenced from: /usr/local/freesurfer/Freeview.app/Contents/MacOS/../Frameworks/libstdc++.6.dylib Expected in: /usr/lib/libSystem.B.dylib [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Caught signal number 5 TRAP [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger [0]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html#Signal[0]PETSC ERROR: or try http://valgrind.org on linux or man libgmalloc on Apple to find memory corruption errors [0]PETSC ERROR: configure using --with-debugging=yes, recompile, link, and run [0]PETSC ERROR: to get more information on the crash. [0]PETSC ERROR: --------------------- Error Message ------------------------------------ [0]PETSC ERROR: Signal received! [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Petsc Release Version 2.3.3, Patch 13, Thu May 15 17:29:26 CDT 2008 HG revision: 4466c6289a0922df26e20626fd4a0b4dd03c8124 [0]PETSC ERROR: See docs/changes/index.html for recent updates. [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting. [0]PETSC ERROR: See docs/index.html for manual pages. [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Unknown Name on a darwin12. named Franks-iMac.local by franksguest Tue Aug 11 16:25:34 2015 [0]PETSC ERROR: Libraries linked from /usr/pubsw/packages/petsc/2.3.3-p13-64b/src/petsc-2.3.3-p13/lib/darwin12.2.0-c-opt [0]PETSC ERROR: Configure run at Mon Dec 17 15:29:35 2012 [0]PETSC ERROR: Configure options --with-debugging=no --with-cc=gcc --with-fc=0 --download-f-blas-lapack=0 --download-mpich=1 --with-mpi=1 --with-x=0 --with-gnu-copyright-code=0 --with-shared=0 COPTFLAGS=-O3 CXXOPTFLAGS=-O3 FOPTFLAGS=-O3 [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: User provided function() line 0 in unknown directory unknown file [unset]: aborting job: application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0 _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
