Dear Experts, I tried to extract freesurfer cortical values for a ROI defined in a spm-vbm analysis using the commands below but it didn't work.. please could you kindly assist (log attached)?
[spjwker@nanlnx2 FSL]0% cd $SUBJECTS_DIR/fsaverage/surf [spjwker@nanlnx2 surf]0% fslregister --s fsaverage --mov /path/to/avg152T1.nii --reg avg152T1_to_fsaverage.dat mkdir: cannot create directory `/path': Permission denied Log file is avg152T1_to_fsaverage.dat.fslregister.log avg152T1_to_fsaverage.dat.fslregister.log: Permission denied. [spjwker@nanlnx2 surf]1% Many thanks, Lena
Logfile for fslregister.docx
Description: Logfile for fslregister.docx
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