Dear Experts,
I tried to extract freesurfer cortical values for a ROI defined in a spm-vbm analysis following the instructions (https://surfer.nmr.mgh.harvard.edu/fswiki/VolumeRoiCorticalThickness) and got stuck at step 2. Please could you kindly assist? [spjwker@nanlnx2 FSL]0% cd $SUBJECTS_DIR/fsaverage/surf [spjwker@nanlnx2 surf]0% fslregister --s fsaverage --mov /home/spjwker_PAC/Lena/CT_SA/FSL/avg152T1.nii --reg avg152T1_to_fsaverage.dat Log file is avg152T1_to_fsaverage.dat.fslregister.log avg152T1_to_fsaverage.dat.fslregister.log: Permission denied. [spjwker@nanlnx2 surf]1% Many thanks, Lena
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